CI01000050_00274836_00275609


Basic Information

Item Value
gene id CI01000050_00274836_00275609
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 274695 ~ 276437 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00274836_00275609.mRNA
GGATAAATAGCGCAGACTGACTCGAGGTTCACACATCTTTACTGGTTTAACAACTGCTGTAACACGCCTAAAGAAGACGAACATTGTGATCTGATTATCTCATCTCTGATTATCCTCTGATTGGTGAGTATAGCAAGTGAAATGGATTTCGATTTGTTAAACCCGAGACCCCGCTATTTCCCCTTTACTGACGTTCCAAAGCCCGACTACTTCCCCCTGCCATGGGGGGAGCAGAGGTGGTGGGAATGGTTAGAAACTCCAATGGCCAAGACATCGGGGCCAAAGACAGTAACCTGGGCTGACCAATCTGAAAAGAATCCCAAAAAGCATAAATACATGTTCGGGCCCCTGAAAAGCTGCCTTAAACAACCAGAGAAAAAGACACTAAACCGATACACAGAGAAGCCAAGAACACCTGTGTATTACAACGCCTGGTATGAGTACATAAGAAATACAAACCGCAGTCCAGCAGAGCCTGCTGGACCCACGTTCAGGACAGACCCGGTTCTGACAACAAAGAGCTGCCTGAAGGAGACTAAAGAGACCCTTCAGAAGCTTTGCCACCCTCCCACTCCTCCAGAAGTCTCTGAAGATCATGCTGAGGAGCCTCAGGTTAAGAGGGTTCACTGGCCAGACATGAGGTACACTCACCTGCGTTATGAGCCTAAAGAGAAGATGACCTGGAAAGAGAAGGTCAACCTGAAGGAGAGGTGGCGAAAGGACAGGGAAGAAGTGATGCAGTTTAGGGCTGAAGAGCTGATAAAGCCTGAACCTGATTATAAACAAAAGGCAAAAACTTGGCTCAAAATACGGGTCGTAAGACTGCTAAGACTGCGGACACGTCCTCCTGCTGCGTCGCCCTTCAAGAGCTGCTTGAAGGTGACGACACCCAAAAATGATACAGCACCAGTGTGAAGAAAAAGGTCCTCAAAACAAGCAGAAGAAACAACAAAAAAGAATACCACGTGGCCGTTCACGATGCGTCCAAGCGCACAAAAGACGTGTCATGTGAACGGCCACTAAAGCTGACCAAAGAAAGCGGCTTCAAGCGGCTTTCCCCTGCTTTCAAGTTGGTCAGGAATTCGCGGCACTGACCAACTGAAAGCTGCTTGAAGCCGCGGGGGGGAGGAGGGTGACCTCTGACCGGCTCACAGACGTCAGCTGGGACAGGGGCACCACGAAAGGGCACTTTATTATTACCCCCCTCCCCCTCTAGCTCATTATTTATCTATAATATGGGGGAATAATAATATTTTTATTATTCTTCTTTTATTGCTGAAATCGTGCTGCCACTGACAGTTGTGTCACATGATGCTTTTCAAAATCACAGCATTGTTAAAAAGATGATTTGACTCCTTGAATCTGTCCACGTGAGTTCAGTTCAGTGACGGATGTTTGTTTTTGTGCCTTAATGTTCAAACTCAGTCCTGTAGGATTCCTACAACTATATCATAATCTGGACTAATCCTGAAGCAAACAAACTGACTGCATTCTGCTGGAATAACGTCTTCCTCGCTGAGCTCCATGACTTTCAGTTCTTGCCAGTGTTTGTTAAACTCGTGCTGATGCTAGGAACTGATTTAACACAGGATCGTCACACACTTCAGGACTGGATTCAGTTTATGATCCAAATTCCCATAGTTATTCTGCCATTTCAGGGCTTCAGTTTAACAGAAAGAACAAACAAAAACAAGCATTTCATTTCAAATCATTCAAGGGATCAATAATTCAACTGAATCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00274836_00275609.mRNA True 1743 mRNA 0.46 1 274695 276437

Neighbor

gene id symbol gene type direction distance location
CI01000050_00235034_00262436 NA coding upstream 11076 235034 ~ 263619 (+)
CI01000050_00148346_00149410 RHO coding upstream 124914 148220 ~ 149781 (+)
CI01000050_00068652_00068867 NA coding upstream 205352 68652 ~ 69343 (+)
CI01000050_00012155_00026251 NA coding upstream 248444 12079 ~ 26412 (+)
CI01000050_00000004_00000459 NA coding upstream 274090 4 ~ 605 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding downstream 26546 302983 ~ 358292 (+)
CI01000050_00376389_00376735 NA coding downstream 99780 376217 ~ 376964 (+)
CI01000050_00449181_00451580 NA coding downstream 172744 449181 ~ 452047 (+)
CI01000050_00457216_00463632 NA coding downstream 180493 456930 ~ 463646 (+)
CI01000050_00615170_00641706 NA coding downstream 338733 615170 ~ 641774 (+)
G212136 NA non-coding upstream 3430 271058 ~ 271265 (+)
G212017 NA non-coding upstream 85088 106065 ~ 189607 (+)
G211975 NA non-coding upstream 233084 25140 ~ 41611 (+)
G212141 NA non-coding downstream 6050 282487 ~ 282748 (+)
G212076 NA non-coding downstream 6582 283019 ~ 283265 (+)
G212143 NA non-coding downstream 20019 296456 ~ 296698 (+)
G212185 NA non-coding downstream 158800 435237 ~ 435512 (+)
G212190 NA non-coding downstream 189266 465703 ~ 466360 (+)
G212006 NA other upstream 136684 82604 ~ 138011 (+)
G212184 NA other downstream 157247 433684 ~ 434206 (+)
CI01000050_01296683_01297763 SELENOK other downstream 1020209 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1415366 1691374 ~ 1698973 (+)
G212927 NA other downstream 2498402 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2566382 2852118 ~ 2865822 (+)

Expression


Co-expression Network