CI01000050_00376389_00376735


Basic Information

Item Value
gene id CI01000050_00376389_00376735
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 376217 ~ 376964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00376389_00376735.mRNA
CCATAAAATCGATCAACTGCAGTTTGCTTAAATACAGGCAAACTTCATATTCACATTTCAATTGTAATATTCGGATTTTGCAAAGTGTAGGAGCTTTCTGAAAACACACACTGAACTCACGGTGTTGGTTGGGGAGGTGGATGGTGAGGAGTCTGGAGTTATCAGGTTGAGAATGACGTCCATTGGAGAAATCATTGAGCCAGCAGGCGTTCACAGCTCCGTTAGACAAGGCTTCGCTCGGGTCCAGAGCTTAGATTTGAGCGTCAGGAGTATCTGTGCTGTTCCATTACAACATGCAGAGACGCTCAAACAAGCGCAAATGATGTCGCTTACTGAAGAGACGTTCTTAAAACTGAGCGGAAATGGAAACACTGCGTTTGAAAAAGCAAGTGTTCTAAATTCATGCAGAGAATCTTGCAGAATGAAAAACCCAAAAGCTCAGCGTGAAGGTTTAGTGTGAGAGAGAGAAGCAGAGCGAGCCAGAACCCATGAGAAGGGTTTTGTCTCGGCGGGACTCTTTTGGCCAACAAAACAGTGTTGGACAACTAATGAGCAAATTCATTCACGGCTTTCAAGAGCTTAGCCAATGAGTTATGTTGACCTACCAACCTCAACCAATCACAGACAAAGATCATAACCATCCACTGTGTCCAGACTAATGACTGGCTTTGCTTTCAATTACAAACGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00376389_00376735.mRNA True 689 mRNA 0.44 2 376217 376964

Neighbor

gene id symbol gene type direction distance location
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding upstream 17925 302983 ~ 358292 (+)
CI01000050_00274836_00275609 NA coding upstream 99780 274695 ~ 276437 (+)
CI01000050_00235034_00262436 NA coding upstream 112598 235034 ~ 263619 (+)
CI01000050_00148346_00149410 RHO coding upstream 226436 148220 ~ 149781 (+)
CI01000050_00068652_00068867 NA coding upstream 306874 68652 ~ 69343 (+)
CI01000050_00449181_00451580 NA coding downstream 72217 449181 ~ 452047 (+)
CI01000050_00457216_00463632 NA coding downstream 79966 456930 ~ 463646 (+)
CI01000050_00615170_00641706 NA coding downstream 238206 615170 ~ 641774 (+)
CI01000050_00648100_00653861 NA coding downstream 271136 648100 ~ 653873 (+)
CI01000050_00678001_00716978 NA coding downstream 300935 677899 ~ 716978 (+)
G212143 NA non-coding upstream 79519 296456 ~ 296698 (+)
G212076 NA non-coding upstream 92952 283019 ~ 283265 (+)
G212141 NA non-coding upstream 93469 282487 ~ 282748 (+)
G212136 NA non-coding upstream 104952 271058 ~ 271265 (+)
G212017 NA non-coding upstream 186610 106065 ~ 189607 (+)
G212185 NA non-coding downstream 58273 435237 ~ 435512 (+)
G212190 NA non-coding downstream 88739 465703 ~ 466360 (+)
G212188 NA non-coding downstream 89630 466594 ~ 467370 (+)
G212225 NA non-coding downstream 153767 530731 ~ 530950 (+)
G212226 NA non-coding downstream 154014 530978 ~ 531182 (+)
G212006 NA other upstream 238206 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 349805 12079 ~ 26412 (+)
G212184 NA other downstream 56720 433684 ~ 434206 (+)
CI01000050_01296683_01297763 SELENOK other downstream 919682 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1314839 1691374 ~ 1698973 (+)
G212927 NA other downstream 2397875 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2465855 2852118 ~ 2865822 (+)

Expression


Co-expression Network