G212017


Basic Information

Item Value
gene id G212017
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 106065 ~ 189607 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU240519
AGCCATCCAGCATTTAATATGATATTCTAAAATCGATCTATCTTACTGCAGTGTGCAACAGTGTCTCACAGCAGCCGCCGAGCGAACGCACAGAGTAACGTTATAACATCATTTTCAACACACTCAAATGTATCTAATATGATAAACAGAGCTGAGTTACCTCATACTCATGACCGGAAAAGCGGAAGCGGCGCCGGCGACTGTGTCATAATAAAAGTCCCGCTGCTCGTGAGGCGTGTGTTGCACAATCGCTCCAGCGGCCTCGTTCAGCTCCAACAACACTCTGTCCTGCTCTGCT
>TU240520
AGCCATCCAGCATTTAATATGATATTCTAAAATCGATCTATCTTACTGCAGTGTGCAACAGTGTCTCACAGCAGCCGCCGAGCGAACGCACAGAGTAACGTTATAACATCATTTTCAACACACTCAAATGTATCTAATATGATAAACAGAGCTGAGTTACCTCATACTCATGACCAGAAAAGCGGAAGCGGCGCCGGCGACTGTGTCATAATAAAAGTCTCGCTGCTCGTGAGGCGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240519 False 298 lncRNA 0.48 2 106065 139406
TU240520 True 238 lncRNA 0.45 2 106065 189607

Neighbor

gene id symbol gene type direction distance location
CI01000050_00068652_00068867 NA coding upstream 36722 68652 ~ 69343 (+)
CI01000050_00012155_00026251 NA coding upstream 79814 12079 ~ 26412 (+)
CI01000050_00000004_00000459 NA coding upstream 105460 4 ~ 605 (+)
CI01000050_00235034_00262436 NA coding downstream 45427 235034 ~ 263619 (+)
CI01000050_00274836_00275609 NA coding downstream 85088 274695 ~ 276437 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding downstream 113376 302983 ~ 358292 (+)
CI01000050_00376389_00376735 NA coding downstream 186610 376217 ~ 376964 (+)
CI01000050_00449181_00451580 NA coding downstream 259574 449181 ~ 452047 (+)
G211975 NA non-coding upstream 64454 25140 ~ 41611 (+)
G212136 NA non-coding downstream 81451 271058 ~ 271265 (+)
G212141 NA non-coding downstream 92880 282487 ~ 282748 (+)
G212076 NA non-coding downstream 93412 283019 ~ 283265 (+)
G212143 NA non-coding downstream 106849 296456 ~ 296698 (+)
G212185 NA non-coding downstream 245630 435237 ~ 435512 (+)
G212184 NA other downstream 244077 433684 ~ 434206 (+)
CI01000050_01296683_01297763 SELENOK other downstream 1107039 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1502196 1691374 ~ 1698973 (+)
G212927 NA other downstream 2585232 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2653212 2852118 ~ 2865822 (+)

Expression


Co-expression Network