G212188


Basic Information

Item Value
gene id G212188
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 466594 ~ 467370 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU240710
ATTTAAAACATAATTCACATTAAGGCTGGCAGAATTCAGTCTCACCTGTCAATCATTATAGGGCATATTCACACTGGAAGAAAATAAATATGACAAACAACATGAATAGAAGCCGTGATGAAATATTTAAAGCATGCAGACACACACTATGACCACTGAAGCCGTCTGTCCTGAAACTAAAGACATCCGTCAGTGAAATGACTGAAGGCCACGTGTGCTGAACACACTGAAGGTGAAGAACTGAACCACATTCATTACTGCATTCTTCTTCACATTGCATATTTATAACAGGGTTCCCACGGGAATATTAGATTTTAGGTTTTAAAATGGCGATTTCAGCATACTCATGAAATGTTCTAGCTGTTCTCGGCTGCAGCAGGTTTAAGCACTCGATATTGTGCTTGTGAAGAGTAAAACTTGCAAACTACAGTGACGTCTTATTTGCAATTGTTCAATAAATTTGTTGAACCCATTCAAATTGATCTAAAATCAAAAAGATTCATTAAAAAAATCCTTATCCAGTGATCATGAAAAGTTATTGATCAAATAATGTGGGAACCCTGCTGAAATGAGTCAAATGATTTGCCATAAAACACTACTTTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACCTTCTGTGACAGTGTTGCATCTGAAAATCTTAGTGTTTTACACATTGGGACAAACGTTAGAAATGAACACAGTATCCATGTATAAATGGGATGTAAATGACTTTTCCTGATTATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240710 True 777 lncRNA 0.37 1 466594 467370

Neighbor

gene id symbol gene type direction distance location
CI01000050_00457216_00463632 NA coding upstream 2948 456930 ~ 463646 (+)
CI01000050_00449181_00451580 NA coding upstream 14547 449181 ~ 452047 (+)
CI01000050_00376389_00376735 NA coding upstream 89630 376217 ~ 376964 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding upstream 108302 302983 ~ 358292 (+)
CI01000050_00274836_00275609 NA coding upstream 190157 274695 ~ 276437 (+)
CI01000050_00615170_00641706 NA coding downstream 147800 615170 ~ 641774 (+)
CI01000050_00648100_00653861 NA coding downstream 180730 648100 ~ 653873 (+)
CI01000050_00678001_00716978 NA coding downstream 210529 677899 ~ 716978 (+)
CI01000050_00718711_00742201 NA coding downstream 251341 718711 ~ 742201 (+)
CI01000050_00753574_00762446 S35E2, SLC35E2B coding downstream 285004 752374 ~ 762767 (+)
G212190 NA non-coding upstream 234 465703 ~ 466360 (+)
G212185 NA non-coding upstream 31082 435237 ~ 435512 (+)
G212143 NA non-coding upstream 169896 296456 ~ 296698 (+)
G212076 NA non-coding upstream 183329 283019 ~ 283265 (+)
G212141 NA non-coding upstream 183846 282487 ~ 282748 (+)
G212225 NA non-coding downstream 63361 530731 ~ 530950 (+)
G212226 NA non-coding downstream 63608 530978 ~ 531182 (+)
G212230 NA non-coding downstream 67478 534848 ~ 535088 (+)
G212234 NA non-coding downstream 72750 540120 ~ 540860 (+)
G212107 NA non-coding downstream 81653 549023 ~ 549256 (+)
G212184 NA other upstream 32388 433684 ~ 434206 (+)
G212006 NA other upstream 328583 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 440182 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 829276 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1224433 1691374 ~ 1698973 (+)
G212927 NA other downstream 2307469 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2375449 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3337773 3805143 ~ 3808870 (+)

Expression


Co-expression Network