CI01000050_00718711_00742201


Basic Information

Item Value
gene id CI01000050_00718711_00742201
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 718711 ~ 742201 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00718711_00742201.mRNA
CCCGCCCGTCCGCCGGGTGTTTCTATGGTTTCTGATATCCCATGCTGCCCAATCGCGCCTCCTGCTTCTCTCGATGTCACCGCTCAGAAAGCCGACGAATCCCCTCAGCAGCCCGTGGGTCATGACAGCAGCCCGAGCGCAGAGCCGCCCGTCAGCCAGACGGCAGCCGTGGTGCTGCAGCAGCCCTTTGCCACGCCCACTCCACAAGCTGCTGTCAGCAGCAGCCAGTCACAGCCTCAGAGCCCCACCCATCAGCCGCAGCACGCCACAGCGGCGCAGGTGCAGCCGGCCGAGTCTGACGGCGAGGGGCCGCCCCGGCTGGAGTTCGCTGACAGAACAATAAAGACTCTGGACGAGAAACTCCGAAACCTTTTGTACCAGGAGTACCACCCCTCGCAAACCACGAGCTCCGCCTCCGAGCCGCCCGGGTCACCGCCGCTGTCAGACAGCCAGGGCAGCGATGGGGCCGTGAGGAAAGCTGAGAAACTGCCTCAGATTCCAGAGAGGTCTGACAGTCTCGGGACCTTGAGTGACTCTGCTGTTGCCCCCTTCAAAAGACTCCTGAGCAGGTCAGACTCCGGCGCCGGTTCAGGCACACACGCGTCCAAGAGCCACTTCCAGACGGTGCCGACTGATTCAGACGCGTCTTCTCATGATGGCGGAGGAGATGATGTGATGGATCTGGAATCTGAGAACAGACACAGGTCAAAGTCAGCGAGCAAGCGTTACTCGGCCCCTCCGGACTTATATCAGGACACATCTACTTCCTTTCCAGAGGCCAAACCCACAATGCCTTGTGCTCAGAGCTCTCTGTCAGCTGACGGGACGATGCAGTGCCTGTCCTCAGACACGGGAGAGGAGGATCCGAGCGAGGCTCCGTCCGTCAAGCCCTCGTCTCCAGCTCCGGCCCCATCAGACTTCATGAAGCGGGCGGTGGCTTTCCTCCGGCGCTCGGGTCACAGCAGCAGTGTGCAGAGCTCCGATTCGCCCACGTGTCCTGTGGTGAACGGACACGCCCCGTCGGTCACCAGCCACGCCCACTCTGCTTACGTCAGCAGTGATAATGACTCTGAATTTGAGGACGCTGACATGAAACGAGAGCTACAGAAGCTGAGAGAGAAGCACATGAAGGAGATCTCCGAGCTTCAGGCCCTTCAGAGAGGAGAGATCGAGCAGCTGTATTCTCGGTTAGGTCGGCCTGTTCCACCCAGCGTGGGCTTCCTGCATGCAGTGCCGCCTTCAGGCCGCCGCCGCAGAGCCTCCAAACACAAGCTGAAGGGAAGCCGACTGCTCAATCCCATGGTGCAACAGCTTAGGAGCAACCGAAGCAACAGCTCTACTGAGACGGGCTCCAGTGCGTCGGGGTCTCCGGTCAAGAGCTCGGTTCTGAGCAACAGCTCTGTGGGTTCCAGCACTGCCAGTCCCATGTCAGAACCGCTGGAGCCGGTCCAAACTCAGCAGCCCTGCTCGCTCAAGGGCTCTCTGTCCTCTGACAACATCTATGGCCCTACCACACACACACCATCCAGACAAGGCTGGACCGTTTACCACCAAACATCCGAGCGAATCACCTATAAATCTAGTAGCAAACCGCGCACTAGATTCCTCAGTGGACCCGTGTCTATGTCCATCTGGTCCACTCTGAAACGACTATGTCTAGGGAAAGAGCGCAGCAGTAGGTCTCATAATCCTGGTGCTTCATCATCATCATCCGCGGCCATGCCGGCTTCATCGCCTCGGCCAATCACGGCGCTCGTTCAGGCTCAAGCCAACAACAGCAACAATAAGACTGGCACATTCACAGATGACCTACACAAGCTGGTTGATGATTGGGCGAAAGAGACTCTTGCCTCTGCCCCTCAGCCCCGCCCCTCTGTGTGTCAGACAAGACCACAGAGATCTCATCACACCTTCCAGACCAGCCACACTCCAATGGCCAGAGTTCACAATCAGATAAGAGGCTCAATCCCTCCGGCGGCTGTGAAGCTCCATCTACCCCTGTCCTGTCCGCTGTCAGCCGCTCTGGGTCCCATCATGCCTCACGGCATCACCAGCACCCCGTCGCCCGTACTCCAGCGGGGCGGATACCTGATGCCCACCACCCCGTTCGCTGGGATGATGCCCACCCCTGTGTATCCACACCAGTGGTCCGGTTTGCCCAGTCCAGTAGGCATGTTTGGCACGGCCGCGATGGTCCCGTATCCGACCATGGCCAGCCCGATGCTGCAGACATTTCCTCTGGTGGTCAAAAGCCCAGACTCCCCGATGTGCCCTAGCAAAGCCAGGACTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00718711_00742201.mRNA True 2292 mRNA 0.59 11 718711 742201

Neighbor

gene id symbol gene type direction distance location
CI01000050_00678001_00716978 NA coding upstream 1733 677899 ~ 716978 (+)
CI01000050_00648100_00653861 NA coding upstream 64838 648100 ~ 653873 (+)
CI01000050_00615170_00641706 NA coding upstream 76937 615170 ~ 641774 (+)
CI01000050_00457216_00463632 NA coding upstream 255065 456930 ~ 463646 (+)
CI01000050_00449181_00451580 NA coding upstream 266664 449181 ~ 452047 (+)
CI01000050_00753574_00762446 S35E2, SLC35E2B coding downstream 10173 752374 ~ 762767 (+)
CI01000050_00770066_00782851 CDK11A, CDK11B coding downstream 27865 770066 ~ 782972 (+)
CI01000050_00818849_00822703 UBIAD1 coding downstream 76648 818849 ~ 823139 (+)
CI01000050_00851621_00899726 MIB2 coding downstream 109325 851526 ~ 901164 (+)
CI01000050_00916485_00921744 DCAF1 coding downstream 174284 916485 ~ 921744 (+)
G212261 NA non-coding upstream 54562 663684 ~ 664149 (+)
G212260 NA non-coding upstream 56263 661614 ~ 662448 (+)
G212113 NA non-coding upstream 59498 658564 ~ 659213 (+)
G212257 NA non-coding upstream 71424 647082 ~ 647287 (+)
G212107 NA non-coding upstream 169455 549023 ~ 549256 (+)
G212269 NA non-coding downstream 3746 745947 ~ 746578 (+)
G212104 NA non-coding downstream 21797 763998 ~ 764435 (+)
G212293 NA non-coding downstream 84603 826804 ~ 827128 (+)
G212294 NA non-coding downstream 85617 827818 ~ 828085 (+)
G212296 NA non-coding downstream 167612 909813 ~ 910029 (+)
G212184 NA other upstream 284505 433684 ~ 434206 (+)
G212006 NA other upstream 580700 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 692299 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 554445 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 949602 1691374 ~ 1698973 (+)
G212927 NA other downstream 2032638 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2100618 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3062942 3805143 ~ 3808870 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location