CI01000050_00770066_00782851 (CDK11A, CDK11B)


Basic Information

Item Value
gene id CI01000050_00770066_00782851
gene name CDK11A, CDK11B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 770066 ~ 782972 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_00770066_00782851.mRNA
TGCGAGAGGGAAAGATGGAGGATAAAGATATCCTGTCTGATCTGCAGGACATCAGTGACAGTGAGAGGAAGACCAGCACACCAGAGTCATCACTGGGTGTCCTGAGCGATGAGGAACAGACAGAGGAGGAAGAAGAGGACAGAGAGAATGGAAATCACATTCCTCCGATTCCAGAGTCCCGGTTTGATCACGACTCTGAGGCAAGCGTTGAAGAAGAGGAGGCAGAGGAAGGTGAGGAGGCGGGTGACGTCACGCCACAGTCTCCCTCTCATTCAGCCACTCCAGAAGACAACTACATCCCTGAATCACCTCCCATCTCACCCGTGGAGCTGAAGAAAGAGCTGCCCAAATACCTGCCCGCTTTACAGGGCTGTCGGAGCGTGGAGGAGTTCCAGTGTTTGAACCGCATCGAGGAAGGCACTTACGGAGTCGTCTACAGAGCCAAAGACAAGAAGACGGATGAAATTGTGGCTCTGAAAAGACTGAAGATGGAGAAAGAGAAGGAGGGCTTTCCCATCACCTCTCTCAGAGAGATCAACACCATCCTGAAGGCCCAGCATCCCAACATCGTCACTGTCCGGGAGATCGTCGTGGGCAGTAATATGGATAAAATCTACATTGTGATGAATTATGTTGAACATGATCTGAAGAGTCTCATGGAGACCATGAAACAGCCCTTCCTGCCCGGTGAGGTCAAAACACTGATGATCCAGCTGTTGAGAGGTGTCCGTCATCTCCATGACAACTGGATCCTTCATCGGGACCTGAAGACCTCCAACCTGCTGCTGAGTCACAAAGGCATTTTAAAGATTGGAGACTTTGGTTTGGCAAGAGAGTACGGCTCTCCGCTCAAGCCCTACACACCTGTGGTGGTCACGCTGTGGTACAGATCACCTGACCTGCTACTGGGGGCAAAGGAATACTCCACCGCCGTGGACATGTGGTCCGTGGGCTGTATATTTGGAGAACTGCTCACGCAGAAACCTTTATTCCCTGGCAAATCTGAGATTGATCAAATTAACAAAATTTTCAAGGACCTGGGGTCCCCCAGTGAGAAGATCTGGCCAGGATACAGCGAGCTTCCTGCAGTGAAGAAGATGACTTTCACAGAATATCCTTACAACAACCTGCGCAAGCGCTTCGGAGCGCTGCTGTCCGACCAGGGCTTCGACCTCATGAACAAGTTTCTGACGTACTGCCCTGCCAAGAGGATTAGCGCTGATGAGGCACTCAAACATGAGTATTTCCGGGAGACGCCGCTCCCCATCGAGCCCTCCATGTTTCCCACCTGGCCGGCCAAGAGTGAACAGCAGCGGGTGAAGAGAGGGACCAGCCCACGAGCGCCGGAGGGAGGACAGTTCAGCCAGATGGTACTGAAACTCTTTCACGTCAACATCAAACTCTGTTGCCTTTCTTAACCTGCTAACTGTCAGAGCCGGTAGAGCACTTTTTTTTATTGCACATATTTTAGTAATCACCATAAATTAGGTATCATTTGAAAGCTTAAACATTCAAAATTCATCCTGTGAAAAATGTATA

Function

symbol description
cdk11b Predicted to enable cyclin-dependent protein serine/threonine kinase activity. Acts upstream of or within smoothened signaling pathway. Predicted to be active in nucleus. Orthologous to human CDK11B (cyclin dependent kinase 11B).
cdk11a Enables ATP binding activity and protein serine/threonine kinase activity. Involved in protein phosphorylation; regulation of cell growth; and regulation of mRNA processing. Located in nucleus.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K08818 CDC2L; cell division cycle 2-like

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_00770066_00782851.mRNA True 1539 mRNA 0.50 10 770066 782972

Neighbor

gene id symbol gene type direction distance location
CI01000050_00753574_00762446 S35E2, SLC35E2B coding upstream 7299 752374 ~ 762767 (+)
CI01000050_00718711_00742201 NA coding upstream 27865 718711 ~ 742201 (+)
CI01000050_00678001_00716978 NA coding upstream 53088 677899 ~ 716978 (+)
CI01000050_00648100_00653861 NA coding upstream 116193 648100 ~ 653873 (+)
CI01000050_00615170_00641706 NA coding upstream 128292 615170 ~ 641774 (+)
CI01000050_00818849_00822703 UBIAD1 coding downstream 35877 818849 ~ 823139 (+)
CI01000050_00851621_00899726 MIB2 coding downstream 68554 851526 ~ 901164 (+)
CI01000050_00916485_00921744 DCAF1 coding downstream 133513 916485 ~ 921744 (+)
CI01000050_00931338_00939002 DCAF1 coding downstream 148366 931338 ~ 939002 (+)
CI01000050_00967544_00997883 BSN, BSNA coding downstream 184572 967544 ~ 997883 (+)
G212104 NA non-coding upstream 5631 763998 ~ 764435 (+)
G212269 NA non-coding upstream 23488 745947 ~ 746578 (+)
G212261 NA non-coding upstream 105917 663684 ~ 664149 (+)
G212260 NA non-coding upstream 107618 661614 ~ 662448 (+)
G212113 NA non-coding upstream 110853 658564 ~ 659213 (+)
G212293 NA non-coding downstream 43832 826804 ~ 827128 (+)
G212294 NA non-coding downstream 44846 827818 ~ 828085 (+)
G212296 NA non-coding downstream 126841 909813 ~ 910029 (+)
G212366 NA non-coding downstream 389162 1172134 ~ 1176043 (+)
G212376 NA non-coding downstream 413053 1196025 ~ 1201801 (+)
G212184 NA other upstream 335860 433684 ~ 434206 (+)
G212006 NA other upstream 632055 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 743654 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 513674 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 908831 1691374 ~ 1698973 (+)
G212927 NA other downstream 1991867 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2059847 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3022171 3805143 ~ 3808870 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036827 cdk11b coding NC_007119.7 CM002892.2 53948194 ~ 53960349 (-)
eurasian perch (Perca fluviatilis) G54108 NA non-coding NC_053116.1 CM020913.1 29761076 ~ 29765810 (+)