G212230


Basic Information

Item Value
gene id G212230
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 534848 ~ 535088 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU240754
GTAAGGATTTGAGAGATGCTGTTGTTGTTGCAGAGTTTAACACTTCAAAAGAACAGTCTCATCAAGCCCACATATACAATCACAAAAATAAGTTGATGACATGGTCCTATTAGCCAATAAAAGTGAACGCGGCAAGCGCAAACTTTCAGACAAATGGGAAAATGTGGTATATACTGTGGTTGATTGTGATCCTAAAACCCACATTTACAAGATTAAACACCCTGTATCTGGTCAGTTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240754 True 241 lncRNA 0.38 1 534848 535088

Neighbor

gene id symbol gene type direction distance location
CI01000050_00457216_00463632 NA coding upstream 71202 456930 ~ 463646 (+)
CI01000050_00449181_00451580 NA coding upstream 82801 449181 ~ 452047 (+)
CI01000050_00376389_00376735 NA coding upstream 157884 376217 ~ 376964 (+)
CI01000050_00302983_00357876 CACNA1DB, CACNA1D coding upstream 176556 302983 ~ 358292 (+)
CI01000050_00274836_00275609 NA coding upstream 258411 274695 ~ 276437 (+)
CI01000050_00615170_00641706 NA coding downstream 80082 615170 ~ 641774 (+)
CI01000050_00648100_00653861 NA coding downstream 113012 648100 ~ 653873 (+)
CI01000050_00678001_00716978 NA coding downstream 142811 677899 ~ 716978 (+)
CI01000050_00718711_00742201 NA coding downstream 183623 718711 ~ 742201 (+)
CI01000050_00753574_00762446 S35E2, SLC35E2B coding downstream 217286 752374 ~ 762767 (+)
G212226 NA non-coding upstream 3666 530978 ~ 531182 (+)
G212225 NA non-coding upstream 3898 530731 ~ 530950 (+)
G212188 NA non-coding upstream 67478 466594 ~ 467370 (+)
G212190 NA non-coding upstream 68488 465703 ~ 466360 (+)
G212185 NA non-coding upstream 99336 435237 ~ 435512 (+)
G212234 NA non-coding downstream 5032 540120 ~ 540860 (+)
G212107 NA non-coding downstream 13935 549023 ~ 549256 (+)
G212257 NA non-coding downstream 111994 647082 ~ 647287 (+)
G212113 NA non-coding downstream 123476 658564 ~ 659213 (+)
G212260 NA non-coding downstream 126526 661614 ~ 662448 (+)
G212184 NA other upstream 100642 433684 ~ 434206 (+)
G212006 NA other upstream 396837 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 508436 12079 ~ 26412 (+)
CI01000050_01296683_01297763 SELENOK other downstream 761558 1296365 ~ 1298255 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other downstream 1156715 1691374 ~ 1698973 (+)
G212927 NA other downstream 2239751 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 2307731 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 3270055 3805143 ~ 3808870 (+)

Expression


Co-expression Network