RNA id: TU240884



Basic Information


Item Value
RNA id TU240884
length 567
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G212357
representative False

Chromosome Information


Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1233092 ~ 1233734 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGTAGAGGGAAGCCTTGTGGTTTGAACTCAAGCTATCTTCTTGCTCATTTAAAGTCCTTTGAGAACTCTATGTTTCTGCTCAACTAAAGGACTTTTTTTATGTCACGTGTATGATGAGATGTCTTAATGGTAATTGGAGACCTCGAAGTCCAGTTTAAGTCAAGCTGGTAGCGAGGCTACAGCACATGGCCTTAACTCACACGGTGGGCGACTCAACAAACGACGTTGAACGATTATCTCTCTCGTGGTGGATTATAGGACTTCAAACATTGCATTGCACTCAAATAACCTTGTGGATTTAAAGCTCATTTCATCTTCATCATTTCAACTCATCAAAAGACTGGACTAACGCTAAGTTTACTTCACCTCACTGACTCATTTAAAAGAGACAAAGCTGGCTCTCAAGTTTATTCATTGACTTTGTGACGCATGTAAATAAGCACTTCTGGGGATAATAAAATGGGTTTAAAAGATCATTTGTTTTGTGAAAAGGTTTTATTCAGTACATGTCAAAAATCTGTTGAACCCCTCGGAGTAACATCTAAAAAAAAAGAAAAAAACAAAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU240910 lncRNA upstream 31291 1196025 ~ 1201801 (+) True G212376
TU240899 lncRNA upstream 57049 1172134 ~ 1176043 (+) True G212366
TU240821 lncRNA upstream 323063 909813 ~ 910029 (+) True G212296
TU240819 lncRNA upstream 405007 827818 ~ 828085 (+) True G212294
TU240818 lncRNA upstream 405964 826804 ~ 827128 (+) True G212293
TU241000 lncRNA downstream 98633 1332367 ~ 1336316 (+) True G212466
TU241007 lncRNA downstream 124869 1358603 ~ 1363929 (+) True G212473
TU241048 lncRNA downstream 276199 1509933 ~ 1510161 (+) True G212508
TU241062 lncRNA downstream 313287 1547021 ~ 1548377 (+) True G212522
TU241067 lncRNA downstream 327394 1561128 ~ 1561354 (+) True G212527
CI01000050_01048195_01109752.mRNA mRNA upstream 123340 1047970 ~ 1109752 (+) True CI01000050_01048195_01109752
CI01000050_01039500_01042679.mRNA mRNA upstream 190293 1039500 ~ 1042799 (+) True CI01000050_01039500_01042679
CI01000050_01023375_01033682.mRNA mRNA upstream 198923 1023375 ~ 1034169 (+) True CI01000050_01023375_01033682
CI01000050_01002924_01005496.mRNA mRNA upstream 227578 1002924 ~ 1005514 (+) True CI01000050_01002924_01005496
CI01000050_00967544_00997883.mRNA mRNA upstream 235209 967544 ~ 997883 (+) True CI01000050_00967544_00997883
CI01000050_01261502_01265283.mRNA mRNA downstream 27633 1261367 ~ 1265283 (+) True CI01000050_01261502_01265283
CI01000050_01284083_01292321.mRNA mRNA downstream 50285 1284019 ~ 1293720 (+) True CI01000050_01284083_01292321
CI01000050_01296683_01297763.mRNA mRNA downstream 62631 1296365 ~ 1298255 (+) False CI01000050_01296683_01297763
CI01000050_01301443_01316664.mRNA mRNA downstream 67709 1301443 ~ 1317171 (+) True CI01000050_01301443_01316664
CI01000050_01346318_01366815.mRNA mRNA downstream 112461 1346195 ~ 1367657 (+) True CI01000050_01346318_01366815
TU240705 other upstream 798886 433684 ~ 434206 (+) True G212184
TU240505 other upstream 1095081 82604 ~ 138011 (+) True G212006
TU240463 other upstream 1206680 22484 ~ 26412 (+) True CI01000050_00012155_00026251
TU240937 other downstream 62912 1299364 ~ 1299606 (+) True G212403
TU240958 other downstream 458069 1691803 ~ 1697408 (+) False CI01000050_01691894_01697791
TU241491 other downstream 1541105 2774839 ~ 2775133 (+) True G212927
TU241503 other downstream 1609085 2842819 ~ 2843139 (+) True G212938
TU243391 other downstream 2571409 3805143 ~ 3808739 (+) False CI01000050_03807697_03808793

Expression Profile