CI01000050_02211327_02213220


Basic Information

Item Value
gene id CI01000050_02211327_02213220
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2210794 ~ 2213489 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02211327_02213220.mRNA
CCATATAAACGTAGCATAATTATAATAATAAAACATAGTGGGATATTCAGTGATATTGACTGTGCAATATCGACTTTTGTGATTGGCCAATACCGGCAGACTGGAGCCAATGGAAATGCTTCTCCTTCGGTGCGCGTCTTATTCCACTGAGAACTTCAAAGCAGACCGCTTGAGGTAAATTATCTGGAATGATTAGTATATTAATTGATTTACGATGCCTATATGAGAGTGTTATGTCTGTAGCGTTAATGATCCGTTCTGAGCTCATGGTTAGCATGAAGGTGCTTGCTGGTGATGCTGAGTGTTTTTTATGCGTGTCATGTTATCCTTTATTTATTAAACTGTTATGAGTTTATTTTGCACCAATTCACTGATAGTGTGAGGATGTATGACATCACGAGTATGTACTAGTTGAGTGAACTTGGATGTTCATACATCTAATGAATGAAATTGGAGTGTTTAGTCATTGACAAAGCTTCAAAAAAAGGTATTTTGACTGTTTTTATGTCAGGCGGTACAACCAAATAGTGAGTATGGGGCGAAAAGAGCAGGAGAGACGGAAGAGAAAGCAGGCAGCAGCGTCATTGTCGCAGAATATTGAACAACTGGCAAACAGGGGAAGTTATGGTTATCCATGCCAAATAATATACAAGTGTATTTCAGATAATGAAACGCGACAGCTCAGCGAAGGTCAAGGTGAAATGCGACAGCTCAGCGAAGGTCAAGGTGAAATGCGACAGCTCAGCGAAGGTCAAGGTGAAATGCGACAGCTCAGCGAAGGTCAAGAGGACCCACACCCTGTCATGGAAGGTCAGGAGAAGGAGATATTTAATGATATAGGATTTTTCATTCAGGCCACAAAATCGGTTGAAGAAATCTTAGAGAGTGTGCGTAAGATGTCTGATGGCCAGAAATACCATTTACTCAGGAACCACAACAAGCCTTCTAAAAACTTCATTTTTCCAACACAATTCCTTGCTGGCTGCAAAAGGGCATTCAAACTCGGGTGGTTGGAGGAATATGGCTGGTGGTTGGTGTATGGTTCCAACCTTGATGGTCACTTCTGTGTGTGCTGTGCCCTGTTGGTCAATGCCAAAGAGAGAAAACAAATGGGAGTGTTAGTAAATGCCCCATTCACAAAATGGCACAAGAAAAGCATGGTAATAGGCAGCCATTCAACAAAAGCATATCACTTGGCTGCAGTTGAAAATGCTCAGTTGTTTCTCCAGTCAGTTGAAAAACCTCAGACCCAAATCTCTGTCCTTCTGGACAAGAGTGTACTATACTGTGGTCGCCAGTGCATTGCACTTAGAGGTACATCTGAGAAGCAAAATTCTACTGGCAATCCTGGAAACTTTTTGGCCCTGATGAAACTACTTGCAAACCATGATGAGAAGCTGAAGCAGCACATGGAACAGCCAAAGCTCAGAAATGCCACCTACCTCTCGCCCCAAACCCAAAATCAGATGATTGACGTGATAGGAAAGCGAATTATTCAGGCCCAGATTGTGGACGAGGTCAAAAATGCACAGATCTATACAGTCATGGCTGATGAGGTGACATCCCATAATGTAGAGCTGATGCCATTCTGTGTAAGGTTTGTGGAAAAAGACCTAAATATCAGGGAGGAATTGCTGGAGATTTGCTCTCTGCCACGAATCACAGGCAGCCACATTGCAACCGCAATTAAGGATGTGCTGAGTCACCTCAACATAGAGATTGGTGATTGCAGAGGCCAGGGGTATGATGGTGCCAGCAACATGAGCAGTGAAAATGTTGGTGTCCAGGCTCTGATCAAGAAGGACGCACCTAAAGCAGTGTACATGCACTGTAACGTGTCATTGCACGCTCCTGTGCTCTTCCAGTTGTGCGCAACATGATTGACAAGATGAAGTCTACCATCATATTCTTCACCTACAGCCCAAAGAGGGAACAACTACTCATGGAGGTTGTACATAAGGATGCACACTCTATGGGACAGAGGAAACCACTGATTGACATATGTCGCACAAGATGGGCAGAAAGACATGACGCATACAGCCACTTTTATAGTGCCTTCGTCTTTATTGCATATCACACATGCATATCACATTTGAAAACAATATCACAACCTCATCTGGATTTTTTTTAAGTTATCAGGTTAAGTCTA

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02211327_02213220.mRNA True 2149 mRNA 0.43 3 2210794 2213489

Neighbor

gene id symbol gene type direction distance location
CI01000050_01877310_01902523 ADGRD2 coding upstream 308021 1877310 ~ 1902773 (+)
CI01000050_01803081_01804190 B3GALT4 coding upstream 403836 1800608 ~ 1806958 (+)
CI01000050_01701779_01712905 RBSN coding upstream 497716 1701614 ~ 1713078 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding upstream 512059 1691374 ~ 1698973 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 532234 1674592 ~ 1678560 (+)
CI01000050_02268620_02283626 NADK, NADKA coding downstream 55131 2268620 ~ 2285331 (+)
CI01000050_02290349_02305843 WDR46 coding downstream 75438 2288927 ~ 2306023 (+)
CI01000050_02308087_02311804 NA coding downstream 93750 2307239 ~ 2311898 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding downstream 114737 2328226 ~ 2331515 (+)
CI01000050_02455292_02474612 NA coding downstream 239011 2452500 ~ 2474612 (+)
G212724 NA non-coding upstream 252 2210265 ~ 2210542 (+)
G212710 NA non-coding upstream 2508 2207897 ~ 2208286 (+)
G212714 NA non-coding upstream 6928 2203642 ~ 2203866 (+)
G212629 NA non-coding upstream 11915 2195302 ~ 2198879 (+)
G212631 NA non-coding upstream 63137 2141331 ~ 2147657 (+)
G212626 NA non-coding downstream 18910 2232399 ~ 2232885 (+)
G212741 NA non-coding downstream 33465 2246954 ~ 2247288 (+)
G212742 NA non-coding downstream 36770 2250259 ~ 2250465 (+)
G212751 NA non-coding downstream 107796 2321285 ~ 2321544 (+)
CI01000050_01296683_01297763 SELENOK other upstream 911188 1296365 ~ 1298255 (+)
G212184 NA other upstream 1776588 433684 ~ 434206 (+)
G212006 NA other upstream 2072783 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2184382 12079 ~ 26412 (+)
G212927 NA other downstream 561350 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 629330 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1591654 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1737113 3931890 ~ 3957044 (+)
G214717 NA other downstream 1894093 4107582 ~ 4108280 (+)

Expression


Co-expression Network