G212710


Basic Information

Item Value
gene id G212710
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2207897 ~ 2208286 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241257
TCACTCTGTAAACAGCCACCCCATTCAGTAATGACCTTCTGTGACTTACTCTCTTTGTGGAGGGTGTCAATGATTGTCTCCTGGACCATTGCCAAGTCAGCAGTCTTCCCCATTAGTGTGGTTTCAAAGAACAAAAGATACCTGGAATTTATACTGTAGGGATGGTCATTTAATGAAACTCAAATGTAAATATTCTAATATTTTGAAATACTGGATTTTGGACTTTCATGAGCTGTACGCTCTAATCATCAAAATTAAAAAAAAAAAACTTTTGAAATGTTTTACTTTACATGTAGGGAATCTAGAATATATGAAAGTTTCATTTTTAAAAATAATTTATAATAAAAAAATGAACTTTTTGATGATATTCTAATTATATGACCAGCACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241257 True 390 lncRNA 0.32 1 2207897 2208286

Neighbor

gene id symbol gene type direction distance location
CI01000050_01877310_01902523 ADGRD2 coding upstream 305124 1877310 ~ 1902773 (+)
CI01000050_01803081_01804190 B3GALT4 coding upstream 400939 1800608 ~ 1806958 (+)
CI01000050_01701779_01712905 RBSN coding upstream 494819 1701614 ~ 1713078 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 coding upstream 509162 1691374 ~ 1698973 (+)
CI01000050_01674592_01678560 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 529337 1674592 ~ 1678560 (+)
CI01000050_02211327_02213220 NA coding downstream 2508 2210794 ~ 2213489 (+)
CI01000050_02268620_02283626 NADK, NADKA coding downstream 60334 2268620 ~ 2285331 (+)
CI01000050_02290349_02305843 WDR46 coding downstream 80641 2288927 ~ 2306023 (+)
CI01000050_02308087_02311804 NA coding downstream 98953 2307239 ~ 2311898 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding downstream 119940 2328226 ~ 2331515 (+)
G212714 NA non-coding upstream 4031 2203642 ~ 2203866 (+)
G212629 NA non-coding upstream 9018 2195302 ~ 2198879 (+)
G212631 NA non-coding upstream 60240 2141331 ~ 2147657 (+)
G212670 NA non-coding upstream 113775 2093859 ~ 2094122 (+)
G212621 NA non-coding upstream 143098 2060142 ~ 2064799 (+)
G212724 NA non-coding downstream 1979 2210265 ~ 2210542 (+)
G212626 NA non-coding downstream 24113 2232399 ~ 2232885 (+)
G212741 NA non-coding downstream 38668 2246954 ~ 2247288 (+)
G212742 NA non-coding downstream 41973 2250259 ~ 2250465 (+)
CI01000050_01296683_01297763 SELENOK other upstream 908291 1296365 ~ 1298255 (+)
G212184 NA other upstream 1773691 433684 ~ 434206 (+)
G212006 NA other upstream 2069886 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2181485 12079 ~ 26412 (+)
G212927 NA other downstream 566553 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 634533 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1596857 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1742316 3931890 ~ 3957044 (+)
G214717 NA other downstream 1899296 4107582 ~ 4108280 (+)

Expression


Co-expression Network