CI01000050_02308087_02311804


Basic Information

Item Value
gene id CI01000050_02308087_02311804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2307239 ~ 2311898 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02308087_02311804.mRNA
GTATAAAATGTAAAGTTTTTCATTTTAACTAGTTACAAATCATTTTATTGCAATTATTATAATAATTACATTATCTAATTACTTGCTTGCACTAAAACTAATGCTTATATTTTAAAGATTTTTCTTCAACACAAATTAAGGGCATCCAAAATAATATTGGCATACCTGATTTTGAGAAACGGTCTGTGTTAGCGATTTTTCAGCTCTTTCATTGCAGGTTATGTTATGCCAGTAGGTGGCAGCAGCGAGATGCATTGGCGCTGTGCAGACCCATCGGTGTATGATGTCAAAGTACCGCGAGAGCGATTCAAAAGCATAAAGAGTCACATGCTTTTTTTTTCTGCCAACAATTACAAAACAGAAACAAAAAAGTGCTAGGGTTAAAGGCACAAAAATATATAATACAATATCAACCAAATGAGAAAGTAAATAAAAACAAAAGTAAATAAATAATAAAAGGCTTTGCTATTTCACAAAATCTTAAATGCAGCTCTGGAGATGAATACGAGAATGCTAAACTTTTTGAGGAAAACAGGGCTTTGTCACAGGATATGATGTTTTTTTTTCTTCCCTTTATTCTCTTCCCTCACCAAAGAAAGAGTTATATTGTAAACCTGAAATCTGATCCACACTCCAAAGCAGTGGGTGGCAGTAATGCACCAAAAGCTGGATGCCAACACTACGAGACAGTCCCACAATGAGCTTTCCTCAGGACGTGCTGTTTCTGGGTCTGTAGCTTTAAATGCTAATGAGGAGGAGAGAGGCGGGGCAAGGTGGAGGGTGGGTGTGGTCTTAACCAGCTTGCGGCCACGGTACCATGCGCTAATGTTGACAGTGGATGTATCGCAATGGCTCGTAGACACGCAGTCGTTCAAGCGTTTCAGTTCGACCCAGAGTCCGATCCGGATGGAGAAGTACCGGATGAAGAAGCTGCAACTCAGCGGCTACAGCAGGACGTCTCAGAGTGTGAAGTTGTAGATAATAATTTTAGTAAATGCAAACAGTTCTTTTTGAACAACGCTCCTCCTGACTTCACACCAGCAAATGGCGTTTCAGTCAAGCCCATCTGCCAGTGTCTTTGGAATGACAAAGATGAGCAAGTTTATCTTTATGCAACTTTGTACAGCACCACCTGGAAGATCCCCGTCTACTCTGCGTATAGGTTTGGCAGCCCAAATATTGGGAGATGTGACGCTTGGTACATTGAACCTCAGCTGGATGGAGATGATGAGCCATGTATGCAGCCTACAGGCTATGGTACAAATATTGGCAACAATCAGGCTCTTTATAAAGACTATTACAAGTCTGGCTATGACAAAGGTCACCTCTATCCTGTGCTCCACACCAACAATCATCTGTCTATGCTGGCCACATCCACAATGACCAACGCGGCTCCGCAGGATAGAGCTTTCAATCAGAAACAATGGCTGGAACATGAGAAGACTGTTATTAAAGACCTGGAATCCTGTGATGATCCTCTGAAGGCTTATGTGGTGACTGGTGTAGTTCCTAATCTGAACAAAAACGTCCCAAAACTGAAAGGTAGAGTCACTGTGTCACTGTATTACTGGAGAGCCACCTGCTGTCTAAAGGGCGGTCTGTACACAGGAAAGGGCTACTATGGACCGGACAACGGCATAGTGAAGGAATTACCGATAACAGAACTTCAGGACATGCTCAAAGCTTTTTACAATATACAAATTTTTCCAAGCATACCGAAAGTTACACCGCCTAAAAGACCCAGAAGTGAAAATGCATGCAACTAAAAAACTGCAGCTAATCAAGTTTCTTTGCAGCTAATAGAGCAGAAACCAATGCTGATCATCTAATTTTCACATACTCTCCTATTCCCTCTGACTA

Function

NR:

description
Unknown (protein for IMAGE:8780622), partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02308087_02311804.mRNA True 1860 mRNA 0.41 3 2307239 2311898

Neighbor

gene id symbol gene type direction distance location
CI01000050_02290349_02305843 WDR46 coding upstream 1216 2288927 ~ 2306023 (+)
CI01000050_02268620_02283626 NADK, NADKA coding upstream 21908 2268620 ~ 2285331 (+)
CI01000050_02211327_02213220 NA coding upstream 93750 2210794 ~ 2213489 (+)
CI01000050_01877310_01902523 ADGRD2 coding upstream 404466 1877310 ~ 1902773 (+)
CI01000050_01803081_01804190 B3GALT4 coding upstream 500281 1800608 ~ 1806958 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding downstream 16328 2328226 ~ 2331515 (+)
CI01000050_02455292_02474612 NA coding downstream 140602 2452500 ~ 2474612 (+)
CI01000050_02475370_02481302 NA coding downstream 163472 2475370 ~ 2481302 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding downstream 364814 2676712 ~ 2678633 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding downstream 385468 2697366 ~ 2721197 (+)
G212742 NA non-coding upstream 56774 2250259 ~ 2250465 (+)
G212741 NA non-coding upstream 59951 2246954 ~ 2247288 (+)
G212626 NA non-coding upstream 74354 2232399 ~ 2232885 (+)
G212724 NA non-coding upstream 96697 2210265 ~ 2210542 (+)
G212751 NA non-coding downstream 9387 2321285 ~ 2321544 (+)
G212754 NA non-coding downstream 15753 2327651 ~ 2327886 (+)
G212755 NA non-coding downstream 26291 2338189 ~ 2338462 (+)
G212757 NA non-coding downstream 28199 2340097 ~ 2340405 (+)
G212762 NA non-coding downstream 35259 2347157 ~ 2347412 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 609831 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1007633 1296365 ~ 1298255 (+)
G212184 NA other upstream 1873033 433684 ~ 434206 (+)
G212006 NA other upstream 2169228 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2280827 12079 ~ 26412 (+)
G212927 NA other downstream 462941 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 530921 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1493245 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1638704 3931890 ~ 3957044 (+)
G214717 NA other downstream 1795684 4107582 ~ 4108280 (+)

Expression


Co-expression Network