CI01000050_02475370_02481302


Basic Information

Item Value
gene id CI01000050_02475370_02481302
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2475370 ~ 2481302 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02475370_02481302.mRNA
CTGTCTCAGTTGCAGGCGGATCTGGAGCAGGAGTGGCAGGTGAAGTGTGATCAGGCTCTGGCAGCGGCACGTGAACAGCAGAGGAGAGAGACGGCTGAACTCACAGAGCACAGAGACGCACTGCAGCTCAAACTCACACAGCTGCAGGAGAAGTTTAATGCACTCAAACAGTCCCGTGATTCAGAGGAACAGCGTTTACTTCAGCAGCAGGACCAGGGAGAAGAGCTACAGGCCTTGAGAGAAAAGTTACAGCCTGCATTACATTGTGACAGCCGGGTGTTTTACTTCATAAGAGCAGGGAAGATCCATGCCATGACCCCTGTAGTGAAAGCAGTTTTGCGTGTGTTTCAGTGCCGTGCGCTGGAGCAGAGAGCGGTGCTGCTGAAGCAGCAGGAGGAGACGCGTGTTTCAGAGCTGGAGAGGAAGCTGACGGAGCAGCAGCAGCAGACGGACACAGCAGAAGAGGTGAAGCGTGTGATGAATGGAGTGTTTCAGTCGCTCCGAGGGGAGTTTGATCTGAACGACACCTACACAGGAAGTGCTGTTCTCCGAGTGCTGGTCAACACTATCAAGAGTGTCACACTGCAGCTCCTCACTAAGACTGAGAGATCTTCACCTGAACACAGTGAAAAAGAGGAGGATGACGAGGAGAATGACGAGGAGAGAGAGAGCGATGCACAGCACAGTCAGGCGCATATGAACGGGCAGAGAGAGGAAGAGGAGCCGACAGACACAGACCCTGAAGATGGACTGCCACAAGAAGTGATCGCAAAGCTGCCTGATGACATCAGTCCACAGGAAGTGAAGGTAGTTGATGAGAGTGTCCCAGGGCCTGTAGATAAAGCAGAAAGTACACTGACATTAGGCGGACCTCCTAAGAACCCGCCGCCACCCCCTGCTGCTCTACACGAGGACTCCAGCGTCACTCCTGCACAGATCAACAGTTCATCTGAGAGGGTAGAAGAGGAAAATGGAGAGGAACCATTTTTCCAGAGTCCCGTCTCGCACGCACCCGCACCTTCACCCGCAACCACACCCGCAGCCACACCCGCAGCGGCCGATGAAGAGGAGGAGGAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02475370_02481302.mRNA True 1080 mRNA 0.54 7 2475370 2481302

Neighbor

gene id symbol gene type direction distance location
CI01000050_02455292_02474612 NA coding upstream 758 2452500 ~ 2474612 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding upstream 143855 2328226 ~ 2331515 (+)
CI01000050_02308087_02311804 NA coding upstream 163472 2307239 ~ 2311898 (+)
CI01000050_02290349_02305843 WDR46 coding upstream 169347 2288927 ~ 2306023 (+)
CI01000050_02268620_02283626 NADK, NADKA coding upstream 190039 2268620 ~ 2285331 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding downstream 195410 2676712 ~ 2678633 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding downstream 216064 2697366 ~ 2721197 (+)
CI01000050_02745996_02750915 NA coding downstream 264694 2745996 ~ 2751232 (+)
CI01000050_02758917_02764495 SLD5, GINS4 coding downstream 277615 2758917 ~ 2765030 (+)
CI01000050_02778979_02781848 NA coding downstream 297677 2778979 ~ 2782645 (+)
G212800 NA non-coding upstream 47305 2427855 ~ 2428065 (+)
G212797 NA non-coding upstream 55132 2419994 ~ 2420238 (+)
G212794 NA non-coding upstream 57968 2417000 ~ 2417402 (+)
G212791 NA non-coding upstream 61227 2406437 ~ 2414143 (+)
G212786 NA non-coding upstream 72678 2402456 ~ 2402692 (+)
G212703 NA non-coding downstream 27124 2508426 ~ 2509993 (+)
G212829 NA non-coding downstream 42711 2524013 ~ 2524374 (+)
G212862 NA non-coding downstream 92936 2574238 ~ 2574709 (+)
G212840 NA non-coding downstream 113681 2594983 ~ 2597587 (+)
G212888 NA non-coding downstream 127719 2609021 ~ 2611475 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 777962 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1175764 1296365 ~ 1298255 (+)
G212184 NA other upstream 2041164 433684 ~ 434206 (+)
G212006 NA other upstream 2337359 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2448958 12079 ~ 26412 (+)
G212927 NA other downstream 293537 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 361517 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1323841 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1469300 3931890 ~ 3957044 (+)
G214717 NA other downstream 1626280 4107582 ~ 4108280 (+)

Expression


Co-expression Network