G212791


Basic Information

Item Value
gene id G212791
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2406437 ~ 2414143 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241343
TGTTTTATTTTTTGACACAAATTGATCAGCAAAGTAATTTATATTCATCATCTTAACTATACAAATAGTCCTTCACTCCTATACAAGAGAGCGTCTAGAATCTAAAGTATGCCCCGAAAAATGAAGCAGTCTCAAAGAGTCACTCCACCTATAGTGAAGCCTGTACACTGTACAAAAGACAAAGCAAGTCTCCACTGTACTAAAACAGTCTCCATCATTGCTTTCTTCCACACATAAACTTGTTAAAATTGCAAAAGAGATCTGTATACAAAGTAAAAACTCTGCATATAAAGAATGGACAGAAAATATATTAGTTTAAAAGCGAAAAAAAAAAAAGTCTCATCTTCATTTTATCCTTTAACAATCAGGTAACTCATTCAGTGATGTACATAATATCTGTAACACAATCTCACCACCCTCAATACTAGTGCATTTTCTTAACCTTCGAGTGACAGGAAGTCATTAATCTGAAGCCAAATATATTCACTTATCCTTCGAGAATCAATAAAACACTTCAAAGCTAAAAATAGCAGAATAAATAAAAGCAGAAGTGGAAACATGGGCAAACAACACTTAACAATGTCCAGGTGCATATGAGGAGGGCAAATCTGTCAAGAAATGTGACCTGGACATGTTTTCATGAGTTTCACACCAGAACAGGGCCAAAGCAAAAGCAAAAGAGAAACACAAAGTGCAATAACTATACAAATCTAGAACAGAAGGGCGGTGACATGGAGCACTGAAATGCAGCAGCTGAGAGAGGAGAAGTTTACTATTCTATAGTTCAGGAAACATCCCTGAGAACGGGTGTAAAAAAAAAAAGTGATTTTTAGCCATTATGCATTGATGGCGCGTTGAATGTAGGAGTGTGTGTTCAGTGAGAGAAGGTGTGTATGTCGTTGTGAAGGCTGACGGTGGGTGAGGAAAGCTCTCTCTGAAGCCTGCAGAAGCTTTTGCTGCACCGGCAGCGCTGGATCGACATGACATTTCGTGTGATGTTCTCGCCGTCTGGGCAGCGGAATCGCAGACGCACCGTGCGGGATGCGGACGGCTGACAGCACCTGCCATCCACACATGAGCCACAGAGTCCACGGCGAGGGTCTCCTCCGGCCCCTAGGTGGCAGCGCAGGCCCTTGATGTGGTCACAGGGTCGGTCAGGGCCGCAGTCTTGGTTATACTGTTGGGCGCACACCTTACAGCAGCCGCACTCATCCAACACCCAGCTCACTCCGAGCGGACAGGAGGGCAGAGACGGGGGACACGAGCACGGACGGGAACAGCCTCGGGCCGCCTGTGGGAACAGCGCGAGAGATGAGAGAGCAGCACTTCATCACATACAGCCAGGCGGCGGGAATGAAAGGCTTTCACTGTCGTGACTCATGACAGTAGGAGTCGTCAGGCCAATGTTTTTGTAAGTTTGTATGAGTGGGTTAGGCTGTGTTTATAAAATACACTCACTTAGGTGTCTGTGTTTGAAATGTGACTGTAGAATTGAATCATAAATAAACACTGTAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241343 True 1517 lncRNA 0.44 2 2406437 2414143

Neighbor

gene id symbol gene type direction distance location
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding upstream 74922 2328226 ~ 2331515 (+)
CI01000050_02308087_02311804 NA coding upstream 94539 2307239 ~ 2311898 (+)
CI01000050_02290349_02305843 WDR46 coding upstream 100414 2288927 ~ 2306023 (+)
CI01000050_02268620_02283626 NADK, NADKA coding upstream 121106 2268620 ~ 2285331 (+)
CI01000050_02211327_02213220 NA coding upstream 192948 2210794 ~ 2213489 (+)
CI01000050_02455292_02474612 NA coding downstream 38357 2452500 ~ 2474612 (+)
CI01000050_02475370_02481302 NA coding downstream 61227 2475370 ~ 2481302 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding downstream 262569 2676712 ~ 2678633 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding downstream 283223 2697366 ~ 2721197 (+)
CI01000050_02745996_02750915 NA coding downstream 331853 2745996 ~ 2751232 (+)
G212786 NA non-coding upstream 3745 2402456 ~ 2402692 (+)
G212782 NA non-coding upstream 19838 2386328 ~ 2386599 (+)
G212781 NA non-coding upstream 20357 2385838 ~ 2386080 (+)
G212776 NA non-coding upstream 26145 2379864 ~ 2380292 (+)
G212773 NA non-coding upstream 39245 2366992 ~ 2367192 (+)
G212794 NA non-coding downstream 2857 2417000 ~ 2417402 (+)
G212797 NA non-coding downstream 5851 2419994 ~ 2420238 (+)
G212800 NA non-coding downstream 13712 2427855 ~ 2428065 (+)
G212703 NA non-coding downstream 94283 2508426 ~ 2509993 (+)
G212829 NA non-coding downstream 109870 2524013 ~ 2524374 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 709029 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1106831 1296365 ~ 1298255 (+)
G212184 NA other upstream 1972231 433684 ~ 434206 (+)
G212006 NA other upstream 2268426 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2380025 12079 ~ 26412 (+)
G212927 NA other downstream 360696 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 428676 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1391000 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1536459 3931890 ~ 3957044 (+)
G214717 NA other downstream 1693439 4107582 ~ 4108280 (+)

Expression


Co-expression Network