G212782


Basic Information

Item Value
gene id G212782
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2386328 ~ 2386599 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241332
ATGCTATAAAGGTTTGTCGAAGCTGTGAGTTAGAGGTTAGCATATGCATTCTGACACATTCACATCATTTCCTGTGTCTCTATCAATAAAAGTGTAAACAAAGCCAAAACAGAGAACACTCTAGGTTTGTATGAGATGCAGCCTAGCATTTAGCATTTACATTCTGACACATTTATACATATTGCTAATGAGGGGAATGAGAATGTGAGTCATTTTATGTTTGCACATCATTTCCTGTCTTCTCTATACTGTCATTGTCTTCTACTGTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241332 True 272 lncRNA 0.36 1 2386328 2386599

Neighbor

gene id symbol gene type direction distance location
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding upstream 54813 2328226 ~ 2331515 (+)
CI01000050_02308087_02311804 NA coding upstream 74430 2307239 ~ 2311898 (+)
CI01000050_02290349_02305843 WDR46 coding upstream 80305 2288927 ~ 2306023 (+)
CI01000050_02268620_02283626 NADK, NADKA coding upstream 100997 2268620 ~ 2285331 (+)
CI01000050_02211327_02213220 NA coding upstream 172839 2210794 ~ 2213489 (+)
CI01000050_02455292_02474612 NA coding downstream 65901 2452500 ~ 2474612 (+)
CI01000050_02475370_02481302 NA coding downstream 88771 2475370 ~ 2481302 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding downstream 290113 2676712 ~ 2678633 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding downstream 310767 2697366 ~ 2721197 (+)
CI01000050_02745996_02750915 NA coding downstream 359397 2745996 ~ 2751232 (+)
G212781 NA non-coding upstream 248 2385838 ~ 2386080 (+)
G212776 NA non-coding upstream 6036 2379864 ~ 2380292 (+)
G212773 NA non-coding upstream 19136 2366992 ~ 2367192 (+)
G212766 NA non-coding upstream 30216 2355725 ~ 2356112 (+)
G212764 NA non-coding upstream 32914 2353201 ~ 2353414 (+)
G212786 NA non-coding downstream 15857 2402456 ~ 2402692 (+)
G212791 NA non-coding downstream 19838 2406437 ~ 2414143 (+)
G212794 NA non-coding downstream 30401 2417000 ~ 2417402 (+)
G212797 NA non-coding downstream 33395 2419994 ~ 2420238 (+)
G212800 NA non-coding downstream 41256 2427855 ~ 2428065 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 688920 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1086722 1296365 ~ 1298255 (+)
G212184 NA other upstream 1952122 433684 ~ 434206 (+)
G212006 NA other upstream 2248317 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2359916 12079 ~ 26412 (+)
G212927 NA other downstream 388240 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 456220 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1418544 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1564003 3931890 ~ 3957044 (+)
G214717 NA other downstream 1720983 4107582 ~ 4108280 (+)

Expression


Co-expression Network