CI01000050_02745996_02750915


Basic Information

Item Value
gene id CI01000050_02745996_02750915
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2745996 ~ 2751232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02745996_02750915.mRNA
ACCAGCAGGGAGATGGAGAACTTGGTATCCACTAATAGCAGTGAGGAGAGTTCCAGAACCGACCAATCAGAGAGTGAAGAGAGGACCTTTGTGACCAATCTGTACTGTTTTATGAAGGAAAGAGGCACTCCAATAGAGAGAATTCCCCACCTCGGCTTTAAACAGATCAACCTGTGGAAAATCTACAAAGCCGTGGAGACGCTTGGAGGATATGATGCGGTAACAGCACGGAGGCTATGGAAGAATGTGTACGACGAGCTGGGTGGTAGTCCAGGCAGTACTAGTGCAGCCACCTGCACACGCAGACACTACGAAAGGTTGGTGTTGCCCTTTGAGAGGCAGCTGAGAGGGGAGGAGGACAAACCGCTGCCACCTTCAAAACCTCGCAAACAGTACAAGAGGAGCCCTGAGAACAGGGGAAGTAAGCCAGAGAGCAAGAAGAAGAGGAAGATGGAGAGAGAAGAGTGCGAGGAGAAAATGGGATCAGATCATCACTGTGAGAGAGGCATGTGTTCCCATCACAGTACATGGATGTCATCCTCTGATCGCCTAGACTCTGAGAAGTCTTCCACGATTCCTGTCCATGGTCCGCACCCTGGTACCTGCTCCAGGGAGAAGCTCCTCCTTCAGACTCCCACCCCGGCTGAGGTGATCTCTCCCTTGGAGAAGAAGAAGCGTCTGGCCCAGGCTAGCCTCACTGTCCCTGCCTCTGGCTCCTCTGAGGATGGTGCAGAACTGGAGAGACCCTCCGTCATTCAGCTATCCCACTCTTCCCAGTCTCCTGCTTGCCCTTCGTCTACTCGCACCCGCCACTCTTCCGATGGCTCGCCTCTCCCCGTCTCCTCTCCGTCCGGCTCCTTATCCCGTAGCCCATCTCCTTACTCGGTCTCCTCCGAGGACTGTATAGCCGTGCCGGACCAGAAGTCTCCAGTCAAAGAGACCGAAACTAAGACACCTTCTCGTTTGCCCACTCTCCCCACATCCAAGGCTGGTAGCACCGGAGTTTGCAAGCCTCTCGGCTGTTACCCCAACAGCAAAGAACCTGCCAACTATCACCACTACTATTACCGGGAATACCTGCAAGCTGGTCCACACCACTCCGAAAAGACCCAAAGGAGCCTTTCATGGACCTCGGATGGTAAATCTGGCACCAGACATACATCCCACAGGCTGCCCTCGCCTGGCTGCACCAAAGCCTGCTGGGTCCCTCATGCCTCCAGCTTCTCCAAAGTCTTACCGCGTGATCCCTGCAGGCCTGTGTCACTACAGCACACTTTTAAGCCGCACATGTCCTACCCCCAGCACCTCCTAAAGAGGCCCACCTCCGATGAAGCCTACTTGAAGAAGATACCAGCGTCCTCTCCACTTCGCATGGCGGACAGGAAAGATAAAGCAAAGACTATGTTGCCCAAGCCTCTGCCTACCCAGCAGTACCTTCTCCACCCTCACGCTGGTCTGACAATTCCCTTCCTACCAACCTTAGAGAGACCCCAAAGAGACTTAGCCGAACAGTTGAAGGCTCTACCTCTTCAACCTGTACTTCTTCCAACCCATCTAACAATACCTCAGACCCACTCTATGCATTGCCCACCAGTGGGCACCCCCTTTCCTGGGTCATATGAGGCTGCTTTGCCCTCCTACCCTTACCCGTTTCCGATCTGGCATCCACCTGCTGGGTACAACATGACGGGCATGCAGCCATACTGAACTATTCTGAAACTACTGGTCCTAGAGGGCCATTGTCCTGCAGAGTTTAGCTCCAACCCTAATCAAATACACCAGAACAAGCAAATCAAGGTCTTCAGGCGGGCGAGTTTTTAATCAAGGTTGGAGCTAAACTCTGCAGGACCAAAGTCGCCCATCCCTGGTCTAGACTTCTATTGTGCTTCAGGGCTTACAAGTCAACATGAAATCAAAATCTAACCTGTTTATTTTTTTAAATACATATTTAGCCATGTTATTCAGAAGAAAACAATGCCTTTTGTGATCAAAATGTAATAACATGCTCAGACTCACCTCTTAAA

Function

NR:

description
Unknown (protein for IMAGE:6793571), partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02745996_02750915.mRNA True 2024 mRNA 0.52 5 2745996 2751232

Neighbor

gene id symbol gene type direction distance location
CI01000050_02697366_02720081 DBNL, DBNLB coding upstream 24799 2697366 ~ 2721197 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding upstream 67363 2676712 ~ 2678633 (+)
CI01000050_02475370_02481302 NA coding upstream 264694 2475370 ~ 2481302 (+)
CI01000050_02455292_02474612 NA coding upstream 271384 2452500 ~ 2474612 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding upstream 414481 2328226 ~ 2331515 (+)
CI01000050_02758917_02764495 SLD5, GINS4 coding downstream 7685 2758917 ~ 2765030 (+)
CI01000050_02778979_02781848 NA coding downstream 27747 2778979 ~ 2782645 (+)
CI01000050_02814263_02825948 POLR3D coding downstream 63031 2814263 ~ 2826153 (+)
CI01000050_02833976_02838912 NA coding downstream 82656 2833888 ~ 2839484 (+)
CI01000050_02852118_02864754 RNF122 coding downstream 100886 2852118 ~ 2865822 (+)
G212888 NA non-coding upstream 134521 2609021 ~ 2611475 (+)
G212840 NA non-coding upstream 148409 2594983 ~ 2597587 (+)
G212862 NA non-coding upstream 171287 2574238 ~ 2574709 (+)
G212829 NA non-coding upstream 221622 2524013 ~ 2524374 (+)
G212703 NA non-coding upstream 236003 2508426 ~ 2509993 (+)
G212928 NA non-coding downstream 24209 2775441 ~ 2775877 (+)
G212929 NA non-coding downstream 24762 2775994 ~ 2776220 (+)
G212930 NA non-coding downstream 25111 2776343 ~ 2776772 (+)
G212912 NA non-coding downstream 32391 2783623 ~ 2797904 (+)
G212933 NA non-coding downstream 52760 2803992 ~ 2804311 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1048588 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1446390 1296365 ~ 1298255 (+)
G212184 NA other upstream 2311790 433684 ~ 434206 (+)
G212006 NA other upstream 2607985 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2719584 12079 ~ 26412 (+)
G212927 NA other downstream 23607 2774839 ~ 2775133 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1053911 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1199370 3931890 ~ 3957044 (+)
G214717 NA other downstream 1356350 4107582 ~ 4108280 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036046 arid5a coding NC_007119.7 CM002892.2 52377516 ~ 52403265 (+)