Gene
RNA
| Item | Value |
|---|---|
| gene id | G212928 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 2775441 ~ 2775877 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241492 | True | 437 | lncRNA | 0.37 | 1 | 2775441 | 2775877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_02758917_02764495 | SLD5, GINS4 | coding | upstream | 10411 | 2758917 ~ 2765030 (+) |
| CI01000050_02745996_02750915 | NA | coding | upstream | 24209 | 2745996 ~ 2751232 (+) |
| CI01000050_02697366_02720081 | DBNL, DBNLB | coding | upstream | 54244 | 2697366 ~ 2721197 (+) |
| CI01000050_02676712_02678594 | UBE2D4, UBE2D4.L | coding | upstream | 96808 | 2676712 ~ 2678633 (+) |
| CI01000050_02475370_02481302 | NA | coding | upstream | 294139 | 2475370 ~ 2481302 (+) |
| CI01000050_02778979_02781848 | NA | coding | downstream | 3102 | 2778979 ~ 2782645 (+) |
| CI01000050_02814263_02825948 | POLR3D | coding | downstream | 38386 | 2814263 ~ 2826153 (+) |
| CI01000050_02833976_02838912 | NA | coding | downstream | 58011 | 2833888 ~ 2839484 (+) |
| CI01000050_02852118_02864754 | RNF122 | coding | downstream | 76241 | 2852118 ~ 2865822 (+) |
| CI01000050_02878198_02942065 | VPS13A | coding | downstream | 102321 | 2878198 ~ 2942735 (+) |
| G212888 | NA | non-coding | upstream | 163966 | 2609021 ~ 2611475 (+) |
| G212840 | NA | non-coding | upstream | 177854 | 2594983 ~ 2597587 (+) |
| G212862 | NA | non-coding | upstream | 200732 | 2574238 ~ 2574709 (+) |
| G212829 | NA | non-coding | upstream | 251067 | 2524013 ~ 2524374 (+) |
| G212703 | NA | non-coding | upstream | 265448 | 2508426 ~ 2509993 (+) |
| G212929 | NA | non-coding | downstream | 117 | 2775994 ~ 2776220 (+) |
| G212930 | NA | non-coding | downstream | 466 | 2776343 ~ 2776772 (+) |
| G212912 | NA | non-coding | downstream | 7746 | 2783623 ~ 2797904 (+) |
| G212933 | NA | non-coding | downstream | 28115 | 2803992 ~ 2804311 (+) |
| G212934 | NA | non-coding | downstream | 32683 | 2808560 ~ 2808917 (+) |
| G212927 | NA | other | upstream | 308 | 2774839 ~ 2775133 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | upstream | 1078033 | 1691374 ~ 1698973 (+) |
| CI01000050_01296683_01297763 | SELENOK | other | upstream | 1475835 | 1296365 ~ 1298255 (+) |
| G212184 | NA | other | upstream | 2341235 | 433684 ~ 434206 (+) |
| G212006 | NA | other | upstream | 2637430 | 82604 ~ 138011 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 1029266 | 3805143 ~ 3808870 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | other | downstream | 1174725 | 3931890 ~ 3957044 (+) |
| G214717 | NA | other | downstream | 1331705 | 4107582 ~ 4108280 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 1815678 | 4589926 ~ 4593049 (+) |
