G212930


Basic Information

Item Value
gene id G212930
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2776343 ~ 2776772 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241494
GGCAGCTATGGGGCAAAGTGAGCCAAATGCTGTGGGGTAAATTGAGCCAGTGTTTTAACTTACCCCACCATAAGGCATTGAATTTAAGTTTTAAAAAAAATGAAGTATAAACTGGTGTCATTTCAGTGTAATATTACGCAACTGGTTTAGTTTATCTTTATTTTCGAGTTTATTTGATAGGAACAGTGTACAAGTACACCAAATCCTTCTCTGATACGAACCAGAGGATGTTTAATCATATATATCTTTCCACCTGTAGTCTCTAATGGCCTAACATGATCGACATTGCAGGAAAACTACCATGTCAAGAACCTTTTGACTAAAATGTTTATTAGTTTCAGTGACATTTATTCATTCTTATTTAGTTTTTCTTTAATTTTACTCAATATCTCTGTTTAGTCTGTTTATGGGAAGGTTACAACTTTGATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241494 True 430 lncRNA 0.34 1 2776343 2776772

Neighbor

gene id symbol gene type direction distance location
CI01000050_02758917_02764495 SLD5, GINS4 coding upstream 11313 2758917 ~ 2765030 (+)
CI01000050_02745996_02750915 NA coding upstream 25111 2745996 ~ 2751232 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding upstream 55146 2697366 ~ 2721197 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding upstream 97710 2676712 ~ 2678633 (+)
CI01000050_02475370_02481302 NA coding upstream 295041 2475370 ~ 2481302 (+)
CI01000050_02778979_02781848 NA coding downstream 2207 2778979 ~ 2782645 (+)
CI01000050_02814263_02825948 POLR3D coding downstream 37491 2814263 ~ 2826153 (+)
CI01000050_02833976_02838912 NA coding downstream 57116 2833888 ~ 2839484 (+)
CI01000050_02852118_02864754 RNF122 coding downstream 75346 2852118 ~ 2865822 (+)
CI01000050_02878198_02942065 VPS13A coding downstream 101426 2878198 ~ 2942735 (+)
G212929 NA non-coding upstream 123 2775994 ~ 2776220 (+)
G212928 NA non-coding upstream 466 2775441 ~ 2775877 (+)
G212888 NA non-coding upstream 164868 2609021 ~ 2611475 (+)
G212840 NA non-coding upstream 178756 2594983 ~ 2597587 (+)
G212862 NA non-coding upstream 201634 2574238 ~ 2574709 (+)
G212912 NA non-coding downstream 6851 2783623 ~ 2797904 (+)
G212933 NA non-coding downstream 27220 2803992 ~ 2804311 (+)
G212934 NA non-coding downstream 31788 2808560 ~ 2808917 (+)
G212943 NA non-coding downstream 52788 2829560 ~ 2830995 (+)
G212948 NA non-coding downstream 91793 2868565 ~ 2868795 (+)
G212927 NA other upstream 1210 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1078935 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1476737 1296365 ~ 1298255 (+)
G212184 NA other upstream 2342137 433684 ~ 434206 (+)
G212006 NA other upstream 2638332 82604 ~ 138011 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1028371 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1173830 3931890 ~ 3957044 (+)
G214717 NA other downstream 1330810 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 1814783 4589926 ~ 4593049 (+)

Expression


Co-expression Network