G212862


Basic Information

Item Value
gene id G212862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2574238 ~ 2574709 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241422
CTTCATGGTCAAGGACCTGTTATTGTAAAACAAGAACCTTTTTCTTTTAGAAAACCGTGAATGAGGAACGCTGAACTGGAGTGAACCGATACATGAAAGAAAAGTTTACAAAGATTACTCGATTCATTGTGAGTCTCTACCCATCATGCTTTGTGCTCAGGAAAAGGCTTTGTGGGAGGAAAAAAAAAAAAAAAAAAAAACATTTATGTGGATGTTCCATCTTAAAAAGACAGATAGATTCAGACACACGTCTCGAGAAACCCACTCAGCTTCTGACCCTGAACCTTGACCTTTCACCGTTAACCTAAAGGGCAAACAAAGTAGTGACTGACAGCTAAAGCGGAGTACCAGGTTTTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCGTTGGCACCGGAGCAGCAGGCTGGAGCCCTATGAGGTGCTACATTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241422 True 442 lncRNA 0.43 2 2574238 2574709

Neighbor

gene id symbol gene type direction distance location
CI01000050_02475370_02481302 NA coding upstream 92936 2475370 ~ 2481302 (+)
CI01000050_02455292_02474612 NA coding upstream 99626 2452500 ~ 2474612 (+)
CI01000050_02328316_02331115 TUBB4A.S, MGC53997, TUBB4B, TUBB4A, TUBB4B.L, TBB2C, TUBB2B coding upstream 242723 2328226 ~ 2331515 (+)
CI01000050_02308087_02311804 NA coding upstream 262340 2307239 ~ 2311898 (+)
CI01000050_02290349_02305843 WDR46 coding upstream 268215 2288927 ~ 2306023 (+)
CI01000050_02676712_02678594 UBE2D4, UBE2D4.L coding downstream 102003 2676712 ~ 2678633 (+)
CI01000050_02697366_02720081 DBNL, DBNLB coding downstream 122657 2697366 ~ 2721197 (+)
CI01000050_02745996_02750915 NA coding downstream 171287 2745996 ~ 2751232 (+)
CI01000050_02758917_02764495 SLD5, GINS4 coding downstream 184208 2758917 ~ 2765030 (+)
CI01000050_02778979_02781848 NA coding downstream 204270 2778979 ~ 2782645 (+)
G212829 NA non-coding upstream 49864 2524013 ~ 2524374 (+)
G212703 NA non-coding upstream 64245 2508426 ~ 2509993 (+)
G212800 NA non-coding upstream 146173 2427855 ~ 2428065 (+)
G212797 NA non-coding upstream 154000 2419994 ~ 2420238 (+)
G212794 NA non-coding upstream 156836 2417000 ~ 2417402 (+)
G212840 NA non-coding downstream 20274 2594983 ~ 2597587 (+)
G212888 NA non-coding downstream 34312 2609021 ~ 2611475 (+)
G212928 NA non-coding downstream 200732 2775441 ~ 2775877 (+)
G212929 NA non-coding downstream 201285 2775994 ~ 2776220 (+)
G212930 NA non-coding downstream 201634 2776343 ~ 2776772 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 876830 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1274632 1296365 ~ 1298255 (+)
G212184 NA other upstream 2140032 433684 ~ 434206 (+)
G212006 NA other upstream 2436227 82604 ~ 138011 (+)
CI01000050_00012155_00026251 NA other upstream 2547826 12079 ~ 26412 (+)
G212927 NA other downstream 200130 2774839 ~ 2775133 (+)
CI01000050_02852118_02864754 RNF122 other downstream 268110 2852118 ~ 2865822 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 1230434 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 1375893 3931890 ~ 3957044 (+)
G214717 NA other downstream 1532873 4107582 ~ 4108280 (+)

Expression


Co-expression Network