CI01000050_03238081_03239214 (NPY8BR)


Basic Information

Item Value
gene id CI01000050_03238081_03239214
gene name NPY8BR
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3237717 ~ 3239314 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03238081_03239214.mRNA
CTATAATAATCACAAATTTCTCTTTTTGGATGTGCATTCAAAATATCTGAGGGAGCAAATGCCCCAGTTTGAATGAATCCGAGTGGGGGGATTTCATATTGTTGTCATGTTTTACAACTTTGGTTTTTCTTCTGATCTTGAAAGCTATTTTTTTTATCCTTCTGTCCACAGGTTTCACAGATCGTCAGTTCTGTGGTATGCCAGAAAACAAGATGAGACAACTCGGAAACTAAAAGGAAATTGGTGTTGGGAAGGAGCAGTCTTACGCTGGACAATTCCACTTCATTTTCTCACTTCCCCGGAGATTAAGCCAGACAGAGCAGTCATCATACATTTCAAGAGACACAACTGCAACTGAGCAGCGATGGAGCGGTCTCATCTGAACAACAGCTCTGGGTCTTGGTTATTAGAGGATCCCGTCTGTCCAACCTCTCTCAGCAGCACCACCTTCCTTATTGTAGCATACAGCACCATGTTAGCGGTGGGCCTGGTGGGCAACACTTGCCTGGTCTTAGTCATCACGCGACAGAAAGAGATGCGCAACGTGACCAACATCTTCATCGTCAACCTCTCATGCTCCGATATCCTTGTTTGCCTGGTGTGTTTGCCGGTCACCATTATCTACACCCTAATGGATCGATGGATTTTGGGCGAAGCTTTGTGTAAGGTGACGCCATTCGTCCAGTGTATGTCCGTCACAGTTTCGATTTTCTCCATGGTTCTCATCGCCTTGGAAAGACACCAGCTTATCATCCATCCCACTGGTTGGAAGCCAGTCGTCAGACACTCCTACCTGGCTGTAGCAGTTATCTGGATCGTAGCGTGTTTTATCTCCCTTCCGTTCCTTTCCTTCAACATCCTCACAAACTCGCCCTTCCACAACCTCAGTCTTCCCTTCAACCCCTTCAGCGATCACTTCATCTGCATAGAGCAGTGGCCGTCTGAGGGCAACCGGCTCACTTACACCACAACGCTGCTGCTGTGCCAGTACTGCTTACCGTTGGCGCTCATTCTAGTCTGCTATTTCCGCATATTCCTGCGTCTCAGCCGACGTAAAGACATGGTCGAAAGGGCTCGAGGTGGACGGCAGAAAAAGGCCAAAGGCTCAAAGCGAGTCAACGCCATGCTAGCCTCAATTGTAGCAGCTTTCGCCCTGTGTTGGCTCCCGCTGAATGTCTTCAACACGATTTTTGACTGGAACCACGAGGCCATTCCCGTATGCCAGCATGATGCTATTTTCTCAGCTTGTCACCTCACGGCCATGGCGTCGACATGTGTCAATCCAGTGATCTATGGATTCCTGAACAATAACTTCCAGAAGGAGCTGAAATCACTGCTTTCCAGATGCCGTTGCTGGGGGCCACCCGAGAGTTACGAGAGTTTCCCTTTGTCCACGGTCAGTACGGGCATTACTAAAGGCTCCATCCTGAGCAATGGCTCCACTAGCACTTACCAACCGCACAAGAAAAACAGTTTGGAACAGAAAGAGACCATTTAATGTACTAGAAGACAATGTACCTACATTTTTACGTTTCTTCAAGCACACAGAGATGGCTTGAGAACACTGCCAGCCAATCTGTGCAAGTTTCGTGACTGAA

Function

symbol description
npy8br Enables neuropeptide binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; digestive system; hatching gland; immune system; and otic vesicle. Orthologous to human NPY4R (neuropeptide Y receptor Y4).

GO:

id name namespace
GO:0007631 feeding behavior biological_process

KEGG:

id description
K04204 NPY1R; neuropeptide Y receptor type 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03238081_03239214.mRNA True 1598 mRNA 0.48 1 3237717 3239314

Neighbor

gene id symbol gene type direction distance location
CI01000050_03224108_03230670 NA coding upstream 6556 3224057 ~ 3231161 (+)
CI01000050_03129712_03134758 TBX16 coding upstream 102754 3129712 ~ 3134963 (+)
CI01000050_02995539_03115563 CABIN1 coding upstream 121639 2995539 ~ 3116078 (+)
CI01000050_02978801_02980782 CEP78 coding upstream 256935 2978801 ~ 2980782 (+)
CI01000050_02878198_02942065 VPS13A coding upstream 294982 2878198 ~ 2942735 (+)
CI01000050_03272821_03284544 KCTD9, KCTD9A coding downstream 32905 3272219 ~ 3284762 (+)
CI01000050_03306831_03324064 NA coding downstream 67517 3306831 ~ 3324244 (+)
CI01000050_03392003_03421994 FGFR1A, FGFR1 coding downstream 152689 3392003 ~ 3422913 (+)
CI01000050_03448766_03465009 LGI3 coding downstream 209452 3448766 ~ 3465867 (+)
CI01000050_03528076_03531738 NA coding downstream 288529 3527843 ~ 3532610 (+)
G213019 NA non-coding upstream 25863 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 36075 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 46978 3190519 ~ 3190739 (+)
G212988 NA non-coding upstream 62718 3174704 ~ 3174999 (+)
G212986 NA non-coding upstream 64763 3172624 ~ 3172954 (+)
G213074 NA non-coding downstream 207150 3446464 ~ 3545111 (+)
G213113 NA non-coding downstream 310884 3550198 ~ 3550580 (+)
G213153 NA non-coding downstream 432578 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 489219 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 492654 3731968 ~ 3732173 (+)
CI01000050_02852118_02864754 RNF122 other upstream 371895 2852118 ~ 2865822 (+)
G212927 NA other upstream 462584 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1540309 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 1938111 1296365 ~ 1298255 (+)
G212184 NA other upstream 2803511 433684 ~ 434206 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 565829 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 711288 3931890 ~ 3957044 (+)
G214717 NA other downstream 868268 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 1352241 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 2168271 5407585 ~ 5409417 (+)

Expression


Co-expression Network