G213153


Basic Information

Item Value
gene id G213153
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3671892 ~ 3672877 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU241791
TGTGAAAAAAATATTTTATTACACAGAATGCAAAGCTGTACAAGATTAAAAAACACCATAATATTCACAATAATCTGAGAAAATTCCCAAAGTCCAGGTTAATATCCCTGTGATCACAGTGCTGGTCTCCATACTCTCAGTCCGTGCAAGTCATACACGTAAGGCCGGTATGGAAAGGATTTATAGACTGTCGCTAAAAGTGACGCTCTGAAAAAGTCCTCCTCTGTAGCAGCCATAGCGCTCGCGTCCGATTTCTGAAAGTATTCCTTGGCGTGCTCAGTCGTTAACTGCCTCCGTTTGGTTTTATATCTCCTGTTCTGGAACCAGATTTTCACCTGAGTCTCCGTGAGGTGCAGTGCGCTCGCGAGGTGCGCGCGCTCGGGCGCGCTCAGGTATCGCTGACGGCTGAACTTCTTCTCGAGCTCCAGCACCTGCAGGTGCGTGAATGCGGCGCGCGATCGCTTCTTTTTCACGCCGCCGCCTGTCATCTCTGTCGACGACATTGTTTTATCCTCAGAATCCAGACAAACAGAGATATCTGTTCTTTTGTCGGTTCTGTCGCTCTCAGAATTGCAGAAGTCATCTTTTTTATCCTCTTTTAAGGATAAAATGTCCTCTATGAAAAACGACGTCAACTGCTTGTTTGAATCCGCCATCTGTGTCGCCAAATTCCTGATAAAGTCAAGGATAAAGCGTCTTCCTCCTGGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU241791 True 711 lncRNA 0.46 2 3671892 3672877

Neighbor

gene id symbol gene type direction distance location
CI01000050_03641769_03645039 NA coding upstream 26783 3639187 ~ 3645109 (+)
CI01000050_03599274_03618237 SLC25A37 coding upstream 52852 3599274 ~ 3619040 (+)
CI01000050_03573096_03586434 ENTPD4 coding upstream 84581 3573096 ~ 3587311 (+)
CI01000050_03557372_03567755 CHMP7 coding upstream 103913 3557327 ~ 3567979 (+)
CI01000050_03552033_03552887 NA coding upstream 118969 3551122 ~ 3552923 (+)
CI01000050_03679119_03683710 NA coding downstream 6203 3679080 ~ 3684169 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding downstream 134820 3805143 ~ 3808870 (+)
CI01000050_03814516_03818892 NA coding downstream 140543 3813420 ~ 3818939 (+)
CI01000050_03938328_03956122 RHOBTB2 coding downstream 265451 3931890 ~ 3957044 (+)
CI01000050_03989489_04121180 NA coding downstream 315380 3988257 ~ 4121393 (+)
G213113 NA non-coding upstream 121312 3550198 ~ 3550580 (+)
G213074 NA non-coding upstream 126781 3446464 ~ 3545111 (+)
G213019 NA non-coding upstream 460038 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 470250 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 481153 3190519 ~ 3190739 (+)
G214496 NA non-coding downstream 55656 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 59091 3731968 ~ 3732173 (+)
G214501 NA non-coding downstream 65314 3738191 ~ 3738542 (+)
G214503 NA non-coding downstream 80165 3753042 ~ 3753268 (+)
G214506 NA non-coding downstream 85498 3758375 ~ 3762523 (+)
CI01000050_02852118_02864754 RNF122 other upstream 806070 2852118 ~ 2865822 (+)
G212927 NA other upstream 896759 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1974484 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2372286 1296365 ~ 1298255 (+)
G212184 NA other upstream 3237686 433684 ~ 434206 (+)
G214717 NA other downstream 434705 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 918678 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1734708 5407585 ~ 5409417 (+)

Expression


Co-expression Network