CI01000050_03599274_03618237 (SLC25A37)


Basic Information

Item Value
gene id CI01000050_03599274_03618237
gene name SLC25A37
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3599274 ~ 3619040 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03599274_03618237.mRNA
CGCCGCCCTTCACGCATGGAGTTGCGCACCCAGACGGTCCTGGCGAGTCTGGAGATGTCGGAGGTGAAAAGCGACGGCGGATCATCGGAGGGCGACGAGGATTACGAGAGTTTGCCCGCTCATGCGTCCCTGGGCACGCACATGACAGCGGGCGCCGTGGCCGGAGTGCTGGAGCACACAGTCATGTACCCCGTGGATTCAGTCAAGGCTATTGTCATTGTTTCCTTAGTGGCTGCCAGATTTCACTCACTCGCCGCTACGCATTTGAGAGCCGCATACTACGTGTCTGGAGAGCACATAGTCACAGAGACGCTTCTGATGCCTAACGAACCAGAGGCCCGGGACTTTACCTGGAAGGAACTGGGCTGTAATTGGTTTGTGTGTTCATGGACACGTATGCAGAGTTTACAGCCGGACCCAAAGGCTCAGTACCGTAGCGTGTACGGAGCGCTGAAGAGGATTGCGCGGACCGAGGGCGTCCTTCGGCCCTTGAGGGGCCTCAATATCACTGTGCTGGGGGCCGGCCCCGCCCACGCACTCTATTTCGCCTGCTACGAGCGAATCAAGCGCAGCCTTAGTGACATCATACAGAATGGTGGCAACAGCCACATTGCTAACGGTGTGGCAGGAAGTGTTGCCACTGTCCTCCATGATGCAGTCATGAACCCAGCAGAAGTGGTGAAGCAGAGGATGCAGATGTATAACTCTCCATACCGCAGCCTGTACGACTGCGTACTGACGATCAGTCGCAAGGAAGGACTGGCTGCCTTTTACCGCAGCTACAGCACTCAGCTGACCATGAACATCCCCTTTCAGGCCGTTCACTTCATCACTTATGAATTCATGCAGGAACATTTTAACCCAGAGCGCCAGTACCGGCCTGAAACGCACATCCTGTCCGGAGCGGCGGCCGGAGCCGTGTCCGCTGCCGTCACCACTCCGTTAGACGTGTGTAAGACCTTGCTAAACACGCAGGAGAACGTGGCGCTCAGCTCTGCGCACGTTAGCGGACATCTCTCCGGCATGGTCAACGCGTTCAGGACGGTTTACCGGCTGGGTGGCGTGCCGGCGTTCTTTAAAGGCATCCGAGCTCGGGTCATTTATCAGATGCCGTCTACGGCCATCGCCTGGTCCGTCTATGAGTTCTTCAAGTACTTTTTGACCCAACACGAGCCGCACATCCAGGAACTGGGGAGGGACTCTCACAAGGCCAGTTCCACATGAGGTCCGTTCAGCCGATCCAAAGAGTGAGTATGAAGATCAGCGGATGTTGGAAGAGGCCTTTGGCTCGAGGGGGAATGTAGATACTCATTTCATATGCAGTAGACACTCCAGCAGCTTCTTTGTTTGTCGCTAACCTATTAATTTATTGGAAGGGTTTAATGTTGTTACAAGAATGTATGGACGCTGCACACTACAGAACGTTTCTTGTAAACATGACGGGAATGGAAAGGTAAAGATGTGTAGATGTTTTGTTTGTATTCTCACCCATGTAACATATTTATGATTGAGTGTGATGGCATATGGATGCGCATTTATATTTATATATGCACTCAAACTGTCTTCTCAATATGGAAGGTTGTTTCTGCCGCTGAATAAAAATAAAAAAAGATAATTGCTACTTTTTTATCTCAGTTCTCACTTCATAACTTGTAATTCTGACTTTGTAACACACAATTGCAACTTTATATCAAGCAATTCTAACTTTACATCTCGCAAATCTGACTTTATAACACGCAATTGCGACTTTATATCACGCAATTCTGACGTCAGAATTGTGAGATGTAAACTCGCAATTGCGAGAAAAAATCTGAATTGTGAGATAAAGTAGCAATTACCTTTTTTATATTTTATTTAGTGGTGGAAACAAGCTTTTAGATCTCAATGATAAAACAAACTCATGAGGCCTTTTTTTATTTTTATTTTTTTATTGGCTTTTCTGGACTTTCCCATTTTTCAGGGGTTCAGGAGAGTTTTTATTATGTTTTTATTTTAATTATTTTTAATAATTCAAGGCATTTGACTCA

Function

symbol description
slc25a37 Enables iron ion transmembrane transporter activity. Acts upstream of or within embryonic hemopoiesis; erythrocyte maturation; and iron import into the mitochondrion. Located in mitochondrion. Is expressed in blood island; intermediate cell mass of mesoderm; and lateral plate mesoderm. Orthologous to human SLC25A37 (solute carrier family 25 member 37).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K15113 SLC25A28_37, MFRN; solute carrier family 25 (mitochondrial iron transporter), member 28/37

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03599274_03618237.mRNA True 2027 mRNA 0.48 5 3599274 3619040

Neighbor

gene id symbol gene type direction distance location
CI01000050_03573096_03586434 ENTPD4 coding upstream 11963 3573096 ~ 3587311 (+)
CI01000050_03557372_03567755 CHMP7 coding upstream 31295 3557327 ~ 3567979 (+)
CI01000050_03552033_03552887 NA coding upstream 46351 3551122 ~ 3552923 (+)
CI01000050_03528076_03531738 NA coding upstream 66664 3527843 ~ 3532610 (+)
CI01000050_03448766_03465009 LGI3 coding upstream 133407 3448766 ~ 3465867 (+)
CI01000050_03641769_03645039 NA coding downstream 20147 3639187 ~ 3645109 (+)
CI01000050_03679119_03683710 NA coding downstream 60040 3679080 ~ 3684169 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 coding downstream 188657 3805143 ~ 3808870 (+)
CI01000050_03814516_03818892 NA coding downstream 194380 3813420 ~ 3818939 (+)
CI01000050_03938328_03956122 RHOBTB2 coding downstream 319288 3931890 ~ 3957044 (+)
G213113 NA non-coding upstream 48694 3550198 ~ 3550580 (+)
G213074 NA non-coding upstream 54163 3446464 ~ 3545111 (+)
G213019 NA non-coding upstream 387420 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 397632 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 408535 3190519 ~ 3190739 (+)
G213153 NA non-coding downstream 52852 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 109493 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 112928 3731968 ~ 3732173 (+)
G214501 NA non-coding downstream 119151 3738191 ~ 3738542 (+)
G214503 NA non-coding downstream 134002 3753042 ~ 3753268 (+)
CI01000050_02852118_02864754 RNF122 other upstream 733452 2852118 ~ 2865822 (+)
G212927 NA other upstream 824141 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1901866 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2299668 1296365 ~ 1298255 (+)
G212184 NA other upstream 3165068 433684 ~ 434206 (+)
G214717 NA other downstream 488542 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 972515 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1788545 5407585 ~ 5409417 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036026 slc25a37 coding NC_007119.7 CM002892.2 50190742 ~ 50217915 (+)
bowfin (Amia calva) AMCG00021031 slc25a37,LOC107393770,LOC103371456,LOC106585578 coding CM030127.1 CM030127.1 42237241 ~ 42238378 (-)