CI01000050_03552033_03552887


Basic Information

Item Value
gene id CI01000050_03552033_03552887
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 3551122 ~ 3552923 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_03552033_03552887.mRNA
CTATAAATAAACGTGTCTTTATAATAAAAAACATGCCTTTATTATTAATGTCTAATCTTTCTTGAAACCCTTCTCGCTGACTCACTATTAAGAATGACCGAGATTGTTTACTTTTAACGTAATTAAATTTAAGAAACGTTTTAACCTAATTTAGATAATAATTCACAAGAAAGTGAATATTCAGATAAAGAATTGGGAAAAACAAACTTTAGGAAAAGCCTAGTATCCTACAAAACAAAATCGTTTCATTTTAACATAGGCAAGAACGCCACACATCTCCCATCAACTGAATGAATAAACCGAAAAACACAGGCAACAAACAAATAAATATATGCTAAATTTGCCCGAACTTTTTGTCCGTTTCCGGTTCGTTCCGAAAAGACTATTAGCTTGATAGTAATTTGTGGTAGTTTTTGGAGTTTTATTCTTTACTGTAGGCTAAATGTTACGACATAGCCTGCATGTTTAAATATTGCAATGGCAATATTTTATTTCACTAGCCTACAATACAGACAAATCTAGCCTATTTGAAACTGTTTTGTACATTTTAAGCCCCATCCCGACACCAGCAAAAGATTATCGTTTTCAAAAGATGACTTTTAAGAACGGATATTAAATTTCAGTGTTGTAATTTGGTGTAATGTCAGTTACCTTTGTAAATATTAATTAAAGACTGTCATTATATAATAACGCGCATTCAAAAGTGTCGTAAACGTGACGTGTTGTTTACTTTTAAAGATTATGCTAGCAGATGCACGGACCGTCACAACAGCACATTTTAATGTGTGACTGCTCGCTATTATTCGCTCGTAGTCCCTTGCCGACTTTATATCGTGATTCATGGTCTTAGCTCGATTCGCGATGATAACAGTGACAGGAATACACCCTCCTAGTCTTCCAAATTGCCGAAAATGAAAAAGAGTTTCGATGACAGAAAGCAGTGGACCCATCTGGACAAACTCTTCAATCCCGCTGCTTCTTGCGGTCCCGGCGAAGTCAGGGGTTTTGCGTCGTGTCTTTGGTCCAGTGATTCCTGTGCCAACAGGGTTAAAGAAGACAGTAAGAACGAGCTTGCCAAAAAGGGAACAAATGTAAGAGCCAACTTGCCAACACGTGTAGGTGGTGTGCCTCAGAAGTTCCCTCAGAAGAATGCTTCTTCTGTAAAAGTGCTCCAGAAAAACAATGTAGAGAAACTCCAGACGAGTGAATCTTCCATAAGGGAGCTCCAGACGAATGCTTGTTCTTTAAGGGAACTAAAGAACAAGGAAGATTATGAAAAGGCCTTAGTACATCTTCCACAAATCGTGCCTCAGAACCAACAGTTGCAGCAGAAAAATGCTTTTTCCACAGAGAAGGCAAAGAAAATGGAGAAAGTTGAAAAAATGTGGAACCCACTGACCGACGATGGGCCATGGTCTCTGACTCCATGGGTGGAGAATGTCAGCGAGGATGAGTGGTTTGATGAGTGGTTCGAGGAGCTCACTTCTCAGGTAGAACAAAAGAAAAATGAGACAAAGAAAGATAACAGCTGTCAAGCCAGTGCAAGACAAAACGTAAGTCTTCCAAAGAATTGGCCTCCCAAACAGAGCACACTGCCAAAGACTGAGTACTCCATAAAGCAGCTAAATTCATCTGTTCTACCGTTTCCTCTGTGTAACAGAAGGCCTGTTTGTGATAAAACATGGAAAGAGGAATCACCATCACAGAGAGCTCCCCAAAAGACAAACTTGAAAGCTTTTAAGCCTGTGTGTGCAGCACTAGAATGATTAAGGACACTAAAGTCCCCTGATTTATTAAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_03552033_03552887.mRNA True 1802 mRNA 0.39 1 3551122 3552923

Neighbor

gene id symbol gene type direction distance location
CI01000050_03528076_03531738 NA coding upstream 18512 3527843 ~ 3532610 (+)
CI01000050_03448766_03465009 LGI3 coding upstream 85255 3448766 ~ 3465867 (+)
CI01000050_03392003_03421994 FGFR1A, FGFR1 coding upstream 128209 3392003 ~ 3422913 (+)
CI01000050_03306831_03324064 NA coding upstream 226878 3306831 ~ 3324244 (+)
CI01000050_03272821_03284544 KCTD9, KCTD9A coding upstream 266360 3272219 ~ 3284762 (+)
CI01000050_03557372_03567755 CHMP7 coding downstream 4404 3557327 ~ 3567979 (+)
CI01000050_03573096_03586434 ENTPD4 coding downstream 20173 3573096 ~ 3587311 (+)
CI01000050_03599274_03618237 SLC25A37 coding downstream 46351 3599274 ~ 3619040 (+)
CI01000050_03641769_03645039 NA coding downstream 86264 3639187 ~ 3645109 (+)
CI01000050_03679119_03683710 NA coding downstream 126157 3679080 ~ 3684169 (+)
G213113 NA non-coding upstream 542 3550198 ~ 3550580 (+)
G213074 NA non-coding upstream 6011 3446464 ~ 3545111 (+)
G213019 NA non-coding upstream 339268 3211584 ~ 3211854 (+)
G213016 NA non-coding upstream 349480 3199786 ~ 3201642 (+)
G213000 NA non-coding upstream 360383 3190519 ~ 3190739 (+)
G213153 NA non-coding downstream 118969 3671892 ~ 3672877 (+)
G214496 NA non-coding downstream 175610 3728533 ~ 3728810 (+)
G214500 NA non-coding downstream 179045 3731968 ~ 3732173 (+)
G214501 NA non-coding downstream 185268 3738191 ~ 3738542 (+)
G214503 NA non-coding downstream 200119 3753042 ~ 3753268 (+)
CI01000050_02852118_02864754 RNF122 other upstream 685300 2852118 ~ 2865822 (+)
G212927 NA other upstream 775989 2774839 ~ 2775133 (+)
CI01000050_01691894_01697791 SULT1ST2, SULT1ST3 other upstream 1853714 1691374 ~ 1698973 (+)
CI01000050_01296683_01297763 SELENOK other upstream 2251516 1296365 ~ 1298255 (+)
G212184 NA other upstream 3116916 433684 ~ 434206 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other downstream 252220 3805143 ~ 3808870 (+)
CI01000050_03938328_03956122 RHOBTB2 other downstream 397679 3931890 ~ 3957044 (+)
G214717 NA other downstream 554659 4107582 ~ 4108280 (+)
CI01000050_04591548_04592778 NA other downstream 1038632 4589926 ~ 4593049 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 1854662 5407585 ~ 5409417 (+)

Expression


Co-expression Network