Gene
RNA
| Item | Value |
|---|---|
| gene id | G213074 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000050 |
| NCBI id | null |
| chromosome length | 7556436 |
| location | 3446464 ~ 3545111 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU241706 | True | 297 | lncRNA | 0.31 | 2 | 3446464 | 3545111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000050_03392003_03421994 | FGFR1A, FGFR1 | coding | upstream | 23551 | 3392003 ~ 3422913 (+) |
| CI01000050_03306831_03324064 | NA | coding | upstream | 122220 | 3306831 ~ 3324244 (+) |
| CI01000050_03272821_03284544 | KCTD9, KCTD9A | coding | upstream | 161702 | 3272219 ~ 3284762 (+) |
| CI01000050_03238081_03239214 | NPY8BR | coding | upstream | 207150 | 3237717 ~ 3239314 (+) |
| CI01000050_03224108_03230670 | NA | coding | upstream | 215303 | 3224057 ~ 3231161 (+) |
| CI01000050_03552033_03552887 | NA | coding | downstream | 6011 | 3551122 ~ 3552923 (+) |
| CI01000050_03557372_03567755 | CHMP7 | coding | downstream | 12216 | 3557327 ~ 3567979 (+) |
| CI01000050_03573096_03586434 | ENTPD4 | coding | downstream | 27985 | 3573096 ~ 3587311 (+) |
| CI01000050_03599274_03618237 | SLC25A37 | coding | downstream | 54163 | 3599274 ~ 3619040 (+) |
| CI01000050_03641769_03645039 | NA | coding | downstream | 94076 | 3639187 ~ 3645109 (+) |
| G213019 | NA | non-coding | upstream | 234610 | 3211584 ~ 3211854 (+) |
| G213016 | NA | non-coding | upstream | 244822 | 3199786 ~ 3201642 (+) |
| G213000 | NA | non-coding | upstream | 255725 | 3190519 ~ 3190739 (+) |
| G212988 | NA | non-coding | upstream | 271465 | 3174704 ~ 3174999 (+) |
| G212986 | NA | non-coding | upstream | 273510 | 3172624 ~ 3172954 (+) |
| G213113 | NA | non-coding | downstream | 5087 | 3550198 ~ 3550580 (+) |
| G213153 | NA | non-coding | downstream | 126781 | 3671892 ~ 3672877 (+) |
| G214496 | NA | non-coding | downstream | 183422 | 3728533 ~ 3728810 (+) |
| G214500 | NA | non-coding | downstream | 186857 | 3731968 ~ 3732173 (+) |
| G214501 | NA | non-coding | downstream | 193080 | 3738191 ~ 3738542 (+) |
| CI01000050_02852118_02864754 | RNF122 | other | upstream | 580642 | 2852118 ~ 2865822 (+) |
| G212927 | NA | other | upstream | 671331 | 2774839 ~ 2775133 (+) |
| CI01000050_01691894_01697791 | SULT1ST2, SULT1ST3 | other | upstream | 1749056 | 1691374 ~ 1698973 (+) |
| CI01000050_01296683_01297763 | SELENOK | other | upstream | 2146858 | 1296365 ~ 1298255 (+) |
| G212184 | NA | other | upstream | 3012258 | 433684 ~ 434206 (+) |
| CI01000050_03807697_03808793 | CLCN5B, CLCN5 | other | downstream | 260032 | 3805143 ~ 3808870 (+) |
| CI01000050_03938328_03956122 | RHOBTB2 | other | downstream | 405491 | 3931890 ~ 3957044 (+) |
| G214717 | NA | other | downstream | 562471 | 4107582 ~ 4108280 (+) |
| CI01000050_04591548_04592778 | NA | other | downstream | 1046444 | 4589926 ~ 4593049 (+) |
| CI01000050_05407682_05409108 | FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A | other | downstream | 1862474 | 5407585 ~ 5409417 (+) |
