anos1a (anos1,LOC108428190)


Basic Information

Item Value
gene id anos1a
gene name anos1,LOC108428190
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12673993 ~ 12697315 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931652.2
CCGCCCCTTGCTGTCTGATTGAAGTTTTTTAGTCTCGCTTCGTCCGTCGCTCTCGCGCAAATCCACTTTCTCGTTCGTAGTGTGCGTACAGATTTTGAGCGAAAgagcagccttttttttcccccctcagaGATGCTCGTGATGGGTGCTGCTGTCCCGGTTCGGATTATTTTGGCGCTGATTTGCGGAGTTGCCCTGGGGAGGAAACAGGACTCGTCCTCGGCTCTTAGCGGCATTTTTCGCGCAAGGTGCGCCGCCAGGTGCCTCAGCCTTCACAGCGCGCGCATCGCTCACGCGCCGACCCACTTTCAGAGTAATGGGATCCCTGGGCTGGTGTCAAGGCCATAAGCAATGTGCAAAGTGCCTGGAGCCGTGCAAAGAATCTTGGGAACAGAGGGACGGATCCTGTCGAGAGCCATGCGAGCGCGTGTTTGCCAAGCGTCATGGTGAGTGTGTGACGAGCTGTGAGTTCCTACGCTCTGTAATGGTGCTGAAACAGGGCGAATGTCCGGCTCCAGAACGAGCCAGCGGATTCGCAGCCGCCTGTGTGGAGAGCTGTGAGGAGGACAATGAGTGCCCGGGACACAAGAAGTGCTGCGCCAATGGCTGTGGGCACACATGCCAACCGCCCAGAAACCTCTACAGAGGTGCTCCACTGAAGCCCAGGAAGGAGCTAGTGTTTGAGGAGATGCCATCTGGCGTGTTAGAGGTGCGCTGGTCCTCCAAGTTCAATGTCTCGGCTGAGCCAGTGCTGAATGTGCTGCAGAGGCGCTGGAACTATGGCATCCACCCTAGCGAGGATGGCGCAACTGAGTGGGAAGTGgtagcacagACCTCAGAGGAGCGTGTGTGGCTGGCTGATATTCGTCCAGGTCGCTGGTACCAGTTCAGAGTAGCAGCAGTCAACGTACATGGAACAAGAGGATACACCACCCCCAGCAGACACTTCAGATCCTCCAAAGatccacccccacccccagcGCCTTCTGACCTACAGGTCAGTCACATGACCTTTGGATCGGACAGGTCGGTATCGGTGCATGTGAGCTGGGTGTCTCCAGCAGACCCAGATGTCCCAGTGCACCACTACAAGCTATCCTGGAACTTGATGGTCAGTGAAGGAGGGTACACAATGCCATCCAAACTCAAGAGGAGAATGACCATCAGTGGGgatTCTGAATCAGTTGAGCTGGATGGGTTGAGGGAGGACAGGACTTACACAGTGGAGCTCCAGTCCGTGTCATATTGGGAACAGCTTCCTCTAAAGAGCTCCAAGGCTATCCTGCGTTTCTCAACACAGCAAGCAAAAACCGAACCCACAGCCAGCCCTGTGCTTCAGAAAGGTCAGTCAGACATTCTGGATGTGGGTACACCGTTCTACCAGGACGGACAACTCCAGGTTCGAGTCTACTGGAAGAAACGAGACCCGAATGTGAGCCGTTACCGTGTGCAGTGGTTCCCAGAGTTTTGTTCTCATAATGGAACCAGACTCCAAGAGAAGCTCATTACACAGGAGAATTACGCCAGCTTACCTGGTCTGCAGTTTTCCTGCAAGTATAAAGTGATCATCCAGGCTGTTGGGTCCAAGAGCCGAGCACAGGCAGAGAGCACCACCTTCTCCACCCCACCATGTGCAGCCATTCAAGGGAAGAGCTCTAAACCCATTACCTGCCCTGGAGATCCTGttgCGCCTGCAAAAGTCCAGGCGAGGACAGAGAACCTCACTGCAGTCTTTTCGGTGCATGACAGCAATGTGACAGCTTTGTTCTCATGGGTGGTAGCTGTAACCCAACCCCCTCAGCAGGTCACAGGTTACCAAGTCACCTGGGCGGACGTCACAGCTGAGAGACGCAGCACCAACCAGGCCAACAGCCTCATCTCTCAGTCCCAGATCCTCCCTCCTgAAAGAAAAGAACTAGTTGTCTCTGGCTTGCAGCTGGCATCTCTCTACAGGCTGGAGGTGGGAGTGATCACCGCTGGAGGTCAGGGCCCGACAACATTCAGAACTTTCCAGACTCCAGGCCATGCCAGGCCTGTCCTACACTACAAACCCAAGGTGAAAAAGCACCATTTGAGGTCAGTCATAGAACAGCACTGAAGCTCACACTGGAACATACCATCTTAAACTCCCCCAAACCCAGCTCCTCAGGAACACACAGAACAGAAAGAACCAAAGAACATTGAACAGATCATTCACTGAGAGGATCAGAACCCTGAGAAAACATCTGGCTCTGGGAGAGTTAGGAGAAGGAAATTATGAAAGCGATTACTTGATCCCAGACGTTCTCGACGAAGGATTTCCATCCACCAGAGAGccagaagaaaaggaaaggatagtggtaaaaacaaaacacagcaactgaaaaaaaattgtaaagtaATGATCATAAATGGATATGCAACTATAACCTGAGTgagttttgcattgtttttttttttttttttgaaaaattatcCCTTGATATTCCCTTTCTTTCAATGGCACTTAACCGACAAAGCAGACTGACTGTTAACCTTCACCTCAGCATaacctgtgtttaaaaaaagtgtctgcAAGTCCAGTGTTGCATGTAGTGAGAAGTTTTGCTTTGACCCATAAATGAAGTGGACTCGTGAAGTGGTGTGCGACTGCATGTATAGTTCCCCCATCATAACTTCCTGATTTGTGGGCATGCACCTTTACTATGTGTCAAATTACAGTTATACAAATTGCGATTCATATTCGCTGTGCTGATTTTCAATTCTGTGTGAGTTCCTTGTAAGTGCAATAGGGTTGTTACGGTTTCACAGTTAGTCACAATGTATATTTTTCCACATACTGATTaaaatttaatacttttttggCTCAGTGCGCCACTTTTCCTTGCAGCCATTCTCTTTCATCTTATAATGACAATGTgataaatacagatatttgagacatttatacaaatattccttttcattttcatccctGGCTTGTGTTTTGTTAAAATGGTTGATTATCACCATGAtaactgtgatatttttttgcCTCGGTTATCATATCATGCAAATTCCAAACCGTAACACCCCTAAAGCACACAAAAGAGTGTGTTGTTTTCCGTGTGCTTCTCATGCTGTGGGATTTTATCTGTTGTGTAATTCTTGTATATAGTACGtccttatttatttgtatttgtatttgctaCAACTGTGtaatatttggtgtgtgtgtgtctctgtgtgtgtgagagagaaagagagagaatgtattGTGTATTCTTCCCATCATAAACATCCTCGCAAGGAGTTTTGTATAAAATAGATTTGTAAATTCCCATGGATTTAAAAgtgtactgtacatattttttattattaaaaaaaattccccacACCCTA
>XM_034299951.1
CTCCGCCCCTTGCTGTCTGATTGAAGTTTTTTAGTCTCGCTTCGTCCGTCGCTCTCGCGCAAATCCACTTTCTCGTTCGTAGTGTGCGTACAGATTTTGAGCGAAAgagcagccttttttttcccccctcagaGATGCTCGTGATGGGTGCTGCTGTCCCGGTTCGGATTATTTTGGCGCTGATTTGCGGAGTTGCCCTGGGGAGGAAACAGGACTCGTCCTCGGCTCTTAGCGGCATTTTTCGCGCAAGGTGCGCCGCCAGGTGCCTCAGCCTTCACAGCGCGCGCATCGCTCACGCGCCGACCCACTTTCAGGTAAAAGCCTTAATGGGATCCCTGGGCTGGTGTCAAGGCCATAAGCAATGTGCAAAGTGCCTGGAGCCGTGCAAAGAATCTTGGGAACAGAGGGACGGATCCTGTCGAGAGCCATGCGAGCGCGTGTTTGCCAAGCGTCATGGTGAGTGTGTGACGAGCTGTGAGTTCCTACGCTCTGTAATGGTGCTGAAACAGGGCGAATGTCCGGCTCCAGAACGAGCCAGCGGATTCGCAGCCGCCTGTGTGGAGAGCTGTGAGGAGGACAATGAGTGCCCGGGACACAAGAAGTGCTGCGCCAATGGCTGTGGGCACACATGCCAACCGCCCAGAAACCTCTACAGAGGTGCTCCACTGAAGCCCAGGAAGGAGCTAGTGTTTGAGGAGATGCCATCTGGCGTGTTAGAGGTGCGCTGGTCCTCCAAGTTCAATGTCTCGGCTGAGCCAGTGCTGAATGTGCTGCAGAGGCGCTGGAACTATGGCATCCACCCTAGCGAGGATGGCGCAACTGAGTGGGAAGTGgtagcacagACCTCAGAGGAGCGTGTGTGGCTGGCTGATATTCGTCCAGGTCGCTGGTACCAGTTCAGAGTAGCAGCAGTCAACGTACATGGAACAAGAGGATACACCACCCCCAGCAGACACTTCAGATCCTCCAAAGatccacccccacccccagcGCCTTCTGACCTACAGGTCAGTCACATGACCTTTGGATCGGACAGGTCGGTATCGGTGCATGTGAGCTGGGTGTCTCCAGCAGACCCAGATGTCCCAGTGCACCACTACAAGCTATCCTGGAACTTGATGGTCAGTGAAGGAGGGTACACAATGCCATCCAAACTCAAGAGGAGAATGACCATCAGTGGGgatTCTGAATCAGTTGAGCTGGATGGGTTGAGGGAGGACAGGACTTACACAGTGGAGCTCCAGTCCGTGTCATATTGGGAACAGCTTCCTCTAAAGAGCTCCAAGGCTATCCTGCGTTTCTCAACACAGCAAGCAAAAACCGAACCCACAGCCAGCCCTGTGCTTCAGAAAGGTCAGTCAGACATTCTGGATGTGGGTACACCGTTCTACCAGGACGGACAACTCCAGGTTCGAGTCTACTGGAAGAAACGAGACCCGAATGTGAGCCGTTACCGTGTGCAGTGGTTCCCAGAGTTTTGTTCTCATAATGGAACCAGACTCCAAGAGAAGCTCATTACACAGGAGAATTACGCCAGCTTACCTGGTCTGCAGTTTTCCTGCAAGTATAAAGTGATCATCCAGGCTGTTGGGTCCAAGAGCCGAGCACAGGCAGAGAGCACCACCTTCTCCACCCCACCATGTGCAGCCATTCAAGGGAAGAGCTCTAAACCCATTACCTGCCCTGGAGATCCTGttgCGCCTGCAAAAGTCCAGGCGAGGACAGAGAACCTCACTGCAGTCTTTTCGGTGCATGACAGCAATGTGACAGCTTTGTTCTCATGGGTGGTAGCTGTAACCCAACCCCCTCAGCAGGTCACAGGTTACCAAGTCACCTGGGCGGACGTCACAGCTGAGAGACGCAGCACCAACCAGGCCAACAGCCTCATCTCTCAGTCCCAGATCCTCCCTCCTgAAAGAAAAGAACTAGTTGTCTCTGGCTTGCAGCTGGCATCTCTCTACAGGCTGGAGGTGGGAGTGATCACCGCTGGAGGTCAGGGCCCGACAACATTCAGAACTTTCCAGACTCCAGGCCATGCCAGGCCTGTCCTACACTACAAACCCAAGGTGAAAAAGCACCATTTGAGGTCAGTCATAGAACAGCACTGAAGCTCACACTGGAACATACCATCTTAAACTCCCCCAAACCCAGCTCCTCAGGAACACACAGAACAGAAAGAACCAAAGAACATTGAACAGATCATTCACTGAGAGGATCAGAACCCTGAGAAAACATCTGGCTCTGGGAGAGTTAGGAGAAGGAAATTATGAAAGCGATTACTTGATCCCAGACGTTCTCGACGAAGGATTTCCATCCACCAGAGAGccagaagaaaaggaaaggatagtggtaaaaacaaaacacagcaactgaaaaaaaattgtaaagtaATGATCATAAATGGATATGCAACTATAACCTGAGTgagttttgcattgtttttttttttttttttgaaaaattatcCCTTGATATTCCCTTTCTTTCAATGGCACTTAACCGACAAAGCAGACTGACTGTTAACCTTCACCTCAGCATaacctgtgtttaaaaaaagtgtctgcAAGTCCAGTGTTGCATGTAGTGAGAAGTTTTGCTTTGACCCATAAATGAAGTGGACTCGTGAAGTGGTGTGCGACTGCATGTATAGTTCCCCCATCATAACTTCCTGATTTGTGGGCATGCACCTTTACTATGTGTCAAATTACAGTTATACAAATTGCGATTCATATTCGCTGTGCTGATTTTCAATTCTGTGTGAGTTCCTTGTAAGTGCAATAGGGTTGTTACGGTTTCACAGTTAGTCACAATGTATATTTTTCCACATACTGATTaaaatttaatacttttttggCTCAGTGCGCCACTTTTCCTTGCAGCCATTCTCTTTCATCTTATAATGACAATGTgataaatacagatatttgagacatttatacaaatattccttttcattttcatccctGGCTTGTGTTTTGTTAAAATGGTTGATTATCACCATGAtaactgtgatatttttttgcCTCGGTTATCATATCATGCAAATTCCAAACCGTAACACCCCTAAAGCACACAAAAGAGTGTGTTGTTTTCCGTGTGCTTCTCATGCTGTGGGATTTTATCTGTTGTGTAATTCTTGTATATAGTACGtccttatttatttgtatttgtatttgctaCAACTGTGtaatatttggtgtgtgtgtgtctctgtgtgtgtgagagagaaagagagagaatgtattGTGTATTCTTCCCATCATAAACATCCTCGCAAGGAGTTTTGTATAAAATAGATTTGTAAATTCCCATGGATTTAAAAgtgtactgtacatattttttattattaaaaaaaattccccacACCCTA

Function

symbol description
anos1 Predicted to be an extracellular matrix structural constituent. Predicted to be involved in neuron differentiation. Predicted to be located in extracellular matrix and extracellular space. Predicted to be active in cell surface. Implicated in hypogonadotropic hypogonadism 1 with or without anosmia.

NR:

description
PREDICTED: anosmin-1-like

GO:

id name namespace
GO:0071542 dopaminergic neuron differentiation biological_process
GO:0097154 GABAergic neuron differentiation biological_process
GO:0097155 fasciculation of sensory neuron axon biological_process
GO:0048920 posterior lateral line neuromast primordium migration biological_process
GO:0007411 axon guidance biological_process
GO:0021772 olfactory bulb development biological_process
GO:0005576 extracellular region cellular_component
GO:0030414 peptidase inhibitor activity molecular_function

KEGG:

id description
K23413 ANOS1, KAL1, WFDC19; anosmin-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931652.2 False 3360 mRNA 0.48 14 12673995 12697315
XM_034299951.1 True 3370 mRNA 0.48 14 12673993 12697315

Neighbor

gene id symbol gene type direction distance location
dpcd dpcd coding upstream 91840 12578328 ~ 12582153 (+)
LOC113537718 NA coding upstream 111159 12555158 ~ 12562834 (+)
nt5c2b nt5c2b,LOC108258961,LOC108435980,LOC107602759,LOC107704322,LOC107738462,LOC105891044,LOC107568788 coding upstream 172465 12474299 ~ 12501528 (+)
LOC113537720 NA coding upstream 232311 12437914 ~ 12441682 (+)
LOC117596105 LOC108258304,LOC108258298 coding upstream 236135 12432936 ~ 12437858 (+)
sts sts coding downstream 29185 12726500 ~ 12738663 (+)
pudp pudp,LOC107681515,LOC107571754,LOC107691609 coding downstream 128635 12825950 ~ 12850197 (+)
nlgn4xa nlgn4x,nlgn4a,LOC107708671,LOC107724264,LOC107602764 coding downstream 212507 12909822 ~ 12990095 (+)
prkx prkx,LOC106575200 coding downstream 536569 13233884 ~ 13270417 (+)
mxra5a mxra5 coding downstream 591511 13288826 ~ 13302116 (+)
G375053 NA non-coding upstream 42763 12629553 ~ 12631230 (+)
G375052 NA non-coding upstream 45650 12628106 ~ 12628343 (+)
G375051 NA non-coding upstream 47761 12624928 ~ 12626232 (+)
G374985 LOC108258315,LOC108435981,LOC107708677,LOC107704309,LOC107568787 non-coding upstream 139694 12533805 ~ 12534299 (+)
G374971 NA non-coding upstream 169834 12502484 ~ 12504159 (+)
G375120 NA non-coding downstream 44421 12741736 ~ 12741947 (+)
G375238 NA non-coding downstream 337895 13035210 ~ 13035502 (+)
G375249 NA non-coding downstream 396907 13094222 ~ 13094421 (+)
LOC117596171 NA non-coding downstream 412999 13110314 ~ 13115156 (+)
G375270 NA non-coding downstream 623958 13321273 ~ 13322869 (+)
metap1d metap1d,LOC107719722,LOC107704334,LOC107699077 other upstream 547798 12109571 ~ 12126195 (+)
LOC113537724 sept3 other upstream 1605991 11062016 ~ 11068002 (+)
G373955 LOC108258951 other upstream 1664373 11006008 ~ 11009620 (+)
pdxkb pdxk,pdxkb,LOC108258310,LOC108428208,LOC103021965,LOC105019670,LOC107376125,LOC106574311 other upstream 2414462 10213033 ~ 10259531 (+)
LOC117596102 sh3pxd2a,sh3pxd2aa,LOC107692111 other upstream 2797440 9839096 ~ 9876553 (+)
gpalpp1 gpalpp1 other downstream 1319208 14016523 ~ 14021131 (+)
G375711 tpt1,LOC107734570,LOC107598740 other downstream 1325935 14023250 ~ 14042614 (+)
LOC113537358 LOC108258898,LOC108258899 other downstream 1661427 14358742 ~ 14360604 (+)
rfx1b LOC108258648,LOC108443334,LOC108239327,LOC102792673,LOC101471697 other downstream 2382372 15079687 ~ 15099905 (+)
smdt1b NA other downstream 2417152 15114467 ~ 15116878 (+)

Expression


Co-expression Network