RNA id: TU210364


Basic Information

Item Value
RNA id TU210364
length 484
lncRNA type inter_gene
GC content 0.54
exon number 1
gene id G142356
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26479302 ~ 26479785 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cgctgccgggccttcttcaccagggtgttgatgtgacaggaccaagacaggtcctgcgtgatgtgaacacccaggtaccggaaactgtccactctctccactggggtcccgtcgatcttgatgggatggtaagagcgcacctgcttcgtgctgaagtccactattaactcctttgttttgctgacgttcaggagaagattgttctcctgacaccatctctccaggttgttgatctcctgaaggtaggccatctcatcgttgttggagatcaggcccaccacgacagtgtcgtcagcaaatttaatgatggtggtggagtttgtagtggccacacagtcatgtgtgtacagcgagtacagcagggggctcagaacacaaccctgaggggctccagtgctgagagtgagggaggatgaggtgtgttttcccatccgtacggcttgtggtctgtcggtcaggaagttggtgatccagtgacgcaggg

Function

GO: NA

KEGG:

id description
ko04212 Longevity regulating pathway - worm

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU210363 lncRNA downstream 106 26478551 ~ 26479196 (-) True G142355
TU210362 lncRNA downstream 6542 26472357 ~ 26472760 (-) True G142354
TU210349 lncRNA downstream 98029 26364019 ~ 26381273 (-) False G142349
TU210350 lncRNA downstream 114627 26364019 ~ 26364675 (-) True G142349
TU210345 lncRNA downstream 159161 26319870 ~ 26320141 (-) True G142347
TU210357 lncRNA upstream 3536 26483321 ~ 26560362 (-) False rps29
TU210370 lncRNA upstream 67403 26547188 ~ 26555553 (-) True G142362
TU210352 lncRNA upstream 77673 26557458 ~ 26560362 (-) False rps29
TU210353 lncRNA upstream 77673 26557458 ~ 26560362 (-) False rps29
TU210355 lncRNA upstream 77673 26557458 ~ 26560362 (-) False rps29
XM_043220471.1 mRNA downstream 39379 26325231 ~ 26439923 (-) False LOC122325425
XM_043220473.1 mRNA downstream 39380 26325231 ~ 26439922 (-) False LOC122325425
XM_043220470.1 mRNA downstream 39380 26325231 ~ 26439922 (-) True LOC122325425
XM_043220472.1 mRNA downstream 39381 26325231 ~ 26439921 (-) False LOC122325425
XM_043220345.1 mRNA downstream 171490 26307401 ~ 26307812 (-) True LOC122325330
XM_043218675.1 mRNA upstream 79161 26558946 ~ 26560387 (-) False rps29
XM_043220347.1 mRNA upstream 89982 26569767 ~ 26574013 (-) True LOC122325332
XM_043219305.1 mRNA upstream 446448 26926233 ~ 26940284 (-) True ganaba
XM_043220055.1 mRNA upstream 467545 26947330 ~ 26948895 (-) True her7
XM_043220045.1 mRNA upstream 666691 27146476 ~ 27148045 (-) True LOC122325133
TU210168 other downstream 245057 26232024 ~ 26234245 (-) True G142278
TU210175 other downstream 291383 26185660 ~ 26187919 (-) True G142281
XR_006247174.1 other downstream 382331 26088415 ~ 26096971 (-) False pgfa
XR_006247173.1 other downstream 382331 26088415 ~ 26096971 (-) True pgfa
XR_006247181.1 other downstream 425124 26052206 ~ 26054178 (-) False LOC122324466
unassigned_transcript_2516 other upstream 134858 26614643 ~ 26614730 (-) True trnas-gcu_32
TU210476 other upstream 443030 26922815 ~ 26924987 (-) True G142444
TU210568 other upstream 750018 27229803 ~ 27256258 (-) False LOC122325335

Expression Profile