RNA id: TU210352



Basic Information


Item Value
RNA id TU210352
length 366
lncRNA type sense_over
GC content 0.51
exon number 4
gene id rps29
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26483321 ~ 26560387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAGCGCGGCTTTTCTGCGCCTGCGCACGAGCGCCACTTCCTTTTCCACATCCCGATCGAGAGAGACGAGATGGGCCATCAGCAGCTCTACTGGAGTCACCCCCGAAAATACGGCCAGGGATCCCGATCCTGCCGGGTTTGCTCGAACAGACACGGTCTGATTCGTAAGTACGGACTCAACATGTGCCGCCAGTGCTTCAGGCAATACGCTAAAGATATCGGCTCCGTCAAGCTGGACTGAACTCATGACCGCCGGTCCTCCGTGGAGAGCCCACCATCCTGACGGCATGAAGTTACTCTGAAACGTTCAATAAACATTGCTTTTGTTTCTGTTGAGAAaaaaaaaaaaaaaaaaaaaaaaaaacc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210370 lncRNA downstream 1905 26547188 ~ 26555553 (-) True G142362
TU210364 lncRNA downstream 77673 26479302 ~ 26479785 (-) True G142356
TU210363 lncRNA downstream 78262 26478551 ~ 26479196 (-) True G142355
TU210362 lncRNA downstream 84698 26472357 ~ 26472760 (-) True G142354
TU210349 lncRNA downstream 176185 26364019 ~ 26381273 (-) False G142349
TU210399 lncRNA upstream 114067 26674429 ~ 26674883 (-) True G142381
TU210402 lncRNA upstream 155830 26716192 ~ 26716709 (-) True G142384
TU210428 lncRNA upstream 190221 26750583 ~ 26757783 (-) False LOC122325367
XR_006247290.1 lncRNA upstream 196691 26757053 ~ 26758203 (-) True LOC122325367
XR_006247289.1 lncRNA upstream 196691 26757053 ~ 26757924 (-) False LOC122325367
XM_043220471.1 mRNA downstream 117535 26325231 ~ 26439923 (-) False LOC122325425
XM_043220473.1 mRNA downstream 117536 26325231 ~ 26439922 (-) False LOC122325425
XM_043220470.1 mRNA downstream 117536 26325231 ~ 26439922 (-) True LOC122325425
XM_043220472.1 mRNA downstream 117537 26325231 ~ 26439921 (-) False LOC122325425
XM_043220345.1 mRNA downstream 249646 26307401 ~ 26307812 (-) True LOC122325330
XM_043220347.1 mRNA upstream 9405 26569767 ~ 26574013 (-) True LOC122325332
XM_043219305.1 mRNA upstream 365871 26926233 ~ 26940284 (-) True ganaba
XM_043220055.1 mRNA upstream 386968 26947330 ~ 26948895 (-) True her7
XM_043220045.1 mRNA upstream 586114 27146476 ~ 27148045 (-) True LOC122325133
XM_043220349.1 mRNA upstream 670297 27230659 ~ 27257482 (-) True LOC122325335
TU210168 other downstream 323213 26232024 ~ 26234245 (-) True G142278
TU210175 other downstream 369539 26185660 ~ 26187919 (-) True G142281
XR_006247174.1 other downstream 460487 26088415 ~ 26096971 (-) False pgfa
XR_006247173.1 other downstream 460487 26088415 ~ 26096971 (-) True pgfa
XR_006247181.1 other downstream 503280 26052206 ~ 26054178 (-) False LOC122324466
unassigned_transcript_2516 other upstream 54281 26614643 ~ 26614730 (-) True trnas-gcu_32
TU210476 other upstream 362453 26922815 ~ 26924987 (-) True G142444
TU210568 other upstream 669441 27229803 ~ 27256258 (-) False LOC122325335

Expression Profile