RNA id: TU217855



Basic Information


Item Value
RNA id TU217855
length 205
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G147457
representative True

Chromosome Information


Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 17503643 ~ 17504912 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CCCGCACACAGCACGGCTCCCGATCCCCAGCCAGCCCGTGTCTCACAGCAGATAGTCCTGACTGCAACTCTTAAACGTCTCGCAGCGAGTCGGATCAGTCCACTTCAGTCAGGCCACACGGGCGTCTGAACTCCTGGCCTCTCTCGTGGATCCATTTGTTAGAAACTGATTACTGCCTACTAGAACAGGACAGGCTGCGTGTCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU217830 lncRNA downstream 44700 17458526 ~ 17458943 (-) True G147448
TU217803 lncRNA downstream 108467 17393836 ~ 17395176 (-) True G147430
TU217791 lncRNA downstream 111418 17391057 ~ 17392225 (-) True G147418
TU217800 lncRNA downstream 116704 17382744 ~ 17386939 (-) True G147427
TU217799 lncRNA downstream 121073 17381617 ~ 17382570 (-) True G147426
TU217869 lncRNA upstream 49853 17554765 ~ 18033374 (-) True G147468
TU217870 lncRNA upstream 49853 17554765 ~ 18032127 (-) False G147468
TU217889 lncRNA upstream 80156 17585068 ~ 17588374 (-) True G147478
TU217885 lncRNA upstream 172011 17676923 ~ 17677980 (-) True G147474
TU217914 lncRNA upstream 373750 17878662 ~ 17883014 (-) True G147496
XM_043221101.1 mRNA downstream 14739 17480409 ~ 17488904 (-) True oatx
XM_043221100.1 mRNA downstream 23604 17463280 ~ 17480039 (-) True LOC122326313
XM_043221099.1 mRNA downstream 23604 17463788 ~ 17480039 (-) False LOC122326313
XM_043221098.1 mRNA downstream 23604 17463788 ~ 17480039 (-) False LOC122326313
XM_043221942.1 mRNA downstream 83201 17417820 ~ 17420442 (-) True cdkn2aipnl
XM_043221003.1 mRNA upstream 86174 17591086 ~ 17627844 (-) True stk32a
XM_043221247.1 mRNA upstream 206343 17711255 ~ 17712135 (-) True LOC122326387
XM_043221248.1 mRNA upstream 385659 17890571 ~ 17930161 (-) True LOC122326388
XM_043221833.1 mRNA upstream 425490 17930402 ~ 17932657 (-) True LOC122326718
XM_043221233.1 mRNA upstream 585967 18090879 ~ 18100510 (-) True LOC122326376
TU217615 other downstream 249271 17153582 ~ 17254372 (-) False fstl4
XR_006247502.1 other downstream 656422 16839576 ~ 16847221 (-) False frmd7
XR_006247428.1 other downstream 773613 16720083 ~ 16730030 (-) False LOC122326138
XR_006247552.1 other downstream 786934 16716499 ~ 16716709 (-) True LOC122327019
XR_006247559.1 other downstream 787408 16716159 ~ 16716235 (-) True LOC122327026
TU217955 other upstream 621317 18126229 ~ 18127999 (-) True G147526
TU217960 other upstream 665168 18170080 ~ 18170584 (-) True G147531
TU218205 other upstream 953462 18458374 ~ 18468851 (-) True G147673
XR_006247482.1 other upstream 1044619 18549531 ~ 18552744 (-) True rbm11
TU218295 other upstream 1194710 18699622 ~ 18701062 (-) True G147728

Expression Profile