RNA id: XM_043222898.1


Basic Information

Item Value
RNA id XM_043222898.1
length 2814
RNA type mRNA
GC content 0.46
exon number 5
gene id abhd14a
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 5825104 ~ 5830334 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttcccagtgtgtgtgtgtggtaacaTGTCTTATTATTAGGAGATATCATTTCGCAACAACTAACAGTTTTCCAAGGAACGACAAACTCACAACCGCAGGAATGAGCACCGGAACCATCGCGCGCGTTCACCCGTTTCCACCCGGAACTGTTATTGTGTGCGACGCATTAAGGCTGCGCTTCTGTCACTACGTGGGAATTATGATCAGTCCCAAACTTTCAGACAGTCACCTATTATTGGATATTTGCAGCGTTTCGCATACTTTATAGATGATGAATTTCTTCCGCAACCGTCTGGTGGTTTTGGGGCTGGTGCTGCTGGCCACGGTGCTGCTGTATCTCCTGCTGCCGTCCATGCGGCAGGGGAGCATGGAGCCGTCTCTGGAGGTGCAGCAGCGGATGGGGCTGATCGCCGCCTCtcctccgccgccgccgccgccgaaCAGCGTCAACATCACGGTCAGGACCGGACAGCTGCCCGGGGACCCGCCGCTCTTCTTCAGGGAGGCTCTGCCTGTGGACGGCGCTGGGCGACAGATAGTGCCCAGGCTGCAGTTGGTGCTTCTTCATGGTCAGGCCTTCACCTCTAAAACTTGGGAGGAGTTGGGCACCCTCAGCCTGCTGGCGTCAAATGGGTACCAAGCCCTTGCTCTCGACCTGCCCGGTTTTGGGAATTCTCCGGACTCGGAGTCGGTAAAGTCGGATCAGAGCCGCGTAGACCTGCTAAAGCGTTTTCTGGAGTCCCTGGGAGTTCGAGCACCGGTGCTACTGAGCCCATCTATGAGCGGTCATTACGCCCTTCCGTTCCTTCAGAAACACAGCGGCCAGCTGCACGGCTTCGTGCCCATCGCCCCGGTGGGCACCCGCGGGATCACCCCACAGCAGTACCGCGACATCCAGACTCCCACACTGGTCGTATATGGAGAGCTAGACACCAATCTGGGCGCCCAATCCCATAAGAACCTGATTCAGCTGCCTCATCACACTGTGGTGAAGTTAGCAGGAGCGCGACACGCCTGTTACATGGACAAACCCCGCGAGTTCCACCGCGCTCTGCTCGACTTCCTCAGCAAACTCGAATGAGGGGCGGAGAGagcaaaaaaacatgtaaaaaaagacTTTCGAAGAGACTaagaaaagacaagaaaatGAAGAACAGGACTGCGGTATAGCTGTAAAACCAGTCCTCAAATGTAACACACACCTGAACGTTCTATCAGCCATCCACATCTGCTCACTCCTTATAAGTTCCTTGCGTGCTCCATCGAGAGATGGCATATTATAACAAACTTCTGCAGAGTTACTATTGTAGATTGTAAACATCCTTTTATCAGTTTATCAACTGCTGCATGTAATGGCCCGTCTGAAGGTTGTTACATTTTCTAGCCTGAGGGTTGTTCTTTAATGCTGTTCCCAGGATTTCCAGTCTGAGGAATGTTCCTGTTACAACAAAATAGCCGTGGTTTCCAGTCAGAGGGTTATCCGTAACATTATTGCCATGGTTTCCCTTTCGAAAGTTGTTCTGTGACGCCGCTGTCAGGGATGTTCCTGTACATTTGCCATTATTTCTAGTCTGAGGGGTGTTCTGTTACGATGTTGCCATGGTTTCTGGTCTAAGAGTTATTCCGTAATGCTGTTGCCGTGGTATTCTTTTAGAGAGTTGTTCTGTAACTCTTTTGCCAGGGATGTTACTGTAACACAGTTGCCATGATTTCCATTCTGAGGGTTGTACCGTAACgcaattgtcatttttttatctttgggTTGTTTCCTAAAATGCTTTGTGATGGATTTCTTTGTGAGGAATGCCACAGTTTCCAGTCAGAGAGTTACTCTGTAACACCGCTGCCATGGTTTCCCATCTCAAGCAGGTTCCTGTAATTCAGTTGCCATAGCTTTCTTTCTGTGGGATGGACGTGTAACACAATTGCCATGGttttcagacagacagatgtaGCTGTAATACAGTCACAGCCATGGTTTCTTGTCTGACAGTTGCTTTCAATAACATAGTTGCCATAGTTTTCATTCTGACGATTGTTCTTGTAACACAGGTGCCATGTTTTTTGGTCTTTGGCTGTACGAAGCTTGTTTTTCTAATACGATTGTCATGGTTTTGTGTAACAACAAGTGTCACATAATGCCAAAAATCGGTGTCATGACTGTCATAACCCTTGTATATGCTTGACATGCAGTCATCCGTCCTACAAGAACATCTCAGAGAACAAAACATTTCGTATTGGTTTGTCTTATCAAGTCCAATCATGTCATGGGGTGTTCACACCAGTAGATGGCACAAACATGCATAACGTAGCATGTCAATTAGTGATTGACTCAACACATGATTTTTAGAAGTACaaaaatggagagaaaggtTGCAGTACTGGATGCCTGTCAtgcctgtaattatttttttgttatcagtAGTTGCCAGACTTATACTGGCAGTAGATTATTCCTTACAATAAATAGAACATTTCCTGAGACTGCAGAGAAGAAAAGCGTTCATTACGTTACACCTAAATGTTTAGGTGctcattacatatttattatttattgcttaaaaGTTATACATGACAGAaactgtaatgtgtgtgtggtatttatGTGCCGTggtctgttgttttatttgtttatagcttgtaaatatgaatatgttttaGAGGACTGTGAGCCACCTCTgacctgtaaatatttttaacatcacAAATCTTTAACCTGTCATTGGGACTGATTTCACATTCCAGTGTGCATGGTACTGAAGGGTCATGATACATGCTTTggtttattgcaaaataaagttCATTAACATTGA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13706 ABHD14; abhydrolase domain-containing protein 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU221714 lncRNA upstream 1002 5822984 ~ 5824102 (+) False hyal2b
TU221702 lncRNA upstream 52062 5772335 ~ 5773042 (+) False rad54l2
TU221684 lncRNA upstream 61942 5758011 ~ 5763162 (+) True G149811
TU221682 lncRNA upstream 71291 5753494 ~ 5753813 (+) False G149810
TU221683 lncRNA upstream 71386 5753179 ~ 5753718 (+) True G149810
TU221723 lncRNA downstream 16834 5847168 ~ 5848586 (+) True lsm7
TU221724 lncRNA downstream 18658 5848992 ~ 5849918 (+) True G149829
TU221732 lncRNA downstream 52630 5882964 ~ 5885190 (+) True G149834
TU221752 lncRNA downstream 74499 5904833 ~ 5913295 (+) True G149846
TU221748 lncRNA downstream 93573 5923907 ~ 6012681 (+) True LOC122327524
XM_043222671.1 mRNA upstream 1186 5810478 ~ 5823918 (+) True hyal2b
XM_043222670.1 mRNA upstream 1186 5812021 ~ 5823918 (+) False hyal2b
XM_043222669.1 mRNA upstream 1186 5812119 ~ 5823918 (+) False hyal2b
XM_043222668.1 mRNA upstream 1186 5815112 ~ 5823918 (+) False hyal2b
XM_043223022.1 mRNA upstream 18496 5803726 ~ 5806608 (+) False tusc2b
XM_043222666.1 mRNA downstream 936 5831270 ~ 5839648 (+) True mfsd14a1
XM_043222667.1 mRNA downstream 936 5831270 ~ 5839648 (+) False mfsd14a1
XM_043223023.1 mRNA downstream 16797 5847131 ~ 5848296 (+) False lsm7
XM_043222591.1 mRNA downstream 20981 5851315 ~ 5859224 (+) True tmprss9
XM_043222592.1 mRNA downstream 21733 5852067 ~ 5859224 (+) False tmprss9
TU221709 other upstream 18481 5803776 ~ 5806623 (+) False tusc2b
XR_006247632.1 other upstream 82466 5734408 ~ 5742638 (+) False LOC122327321
TU221516 other upstream 369677 5453165 ~ 5455427 (+) False LOC122327428
TU221415 other upstream 720668 5103529 ~ 5104436 (+) True G149646
XR_006247646.1 other upstream 1109152 4712862 ~ 4715952 (+) True LOC122327517
TU221722 other downstream 16834 5847168 ~ 5848586 (+) False lsm7
TU221826 other downstream 361313 6191647 ~ 6192659 (+) True G149895
TU221839 other downstream 407953 6238287 ~ 6239357 (+) False npb
XR_006247622.1 other downstream 672580 6502914 ~ 6507672 (+) False ccnt2b
TU222560 other downstream 878154 6708488 ~ 6708891 (+) True G150369

Expression Profile