RNA id: XM_043224727.1


Basic Information

Item Value
RNA id XM_043224727.1
length 2702
RNA type mRNA
GC content 0.46
exon number 13
gene id mybpha
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4070796 ~ 4091301 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aatattgcaaatattacaatgcaggcaggaaacaaaaaaatattgattgtaTTATGTTTAATggattgtttttttactgtaatttatttgcaaaagcttttattcattcaattgtTTTCTTCCGTTTAAGATGGAttcaagtgttttgttttgtgggttatatacatttaaataaattacgcCGAATGCTCCAATGATCCTTGTTTTCTAATTGGTACTAATAGTGTGTTCTTTTTGATTAGACACCACTTGCGCTACGTTTTAATGACTCTAGGCTCAGAAAGAAAGAGTCAGAACTAAATTGTGCTTACACACGATGCTAGTCAGTCACACTCTTACATCACAGAGTGGTGCGCTTCACAAGCTGACGTTTTGGGCAGTCTGACaaatataagctgtttttaaactaCTGAGAAAGTTCTGGAAGGTACATGATGCTTTTTATAGTGTGGAGACCTCTTATATGTCATGAaagctttaatttaatattgcaaTGAGACAAATACATAGCTTTTATTGAGTTATTTAATGAACTCAGGCCACTCAGGCTCAGTGGAAAAGCTCATTTCTCCATTTTGCCTCCCTCTACCGCCTGACTGCACGTATGCACATGCTTGCATTCTCAAGTTTAGACAAAAGGGGGCGCCCTGTTGTGACATTAAAGCGTAAGCTGATGGTGATAAAAAAGCGACGGTCTATTAAAAACGAGAAAAGTAAAATTAGAGTCAGAAATATTTAGCCACGAAATAGGCCAAGCTACATGATGAGTTAAGCAATACTGTTAGTTTGAGTGATGAGGTGAGACCCGTTTAGGGTTATTCCTGAGTTGATAAGAACGGATTTATCAAGGCTATttaaagaggaggaggagttcACGCTCAGGCGGTATAAATTGAACGTCCCGAAAGACTTTGCCATTTCAAAGACCGGCCGTCCTGTTGAGTTTTCCCCAAGCATCATGCCAGCCAAACCAGCACCTATCAAAAAGTCAGCTAAGAAGGCTGCTCCGAAAGAGGAGAAGCCAGCAGAGCCGGCTCCCGCCCCGGTGCCCGAGGCTGCCCCCGCCGAGGAGCCTCCCGCCGAGGCGGCGCCGGTAGAAGCTCCCGCTGAAGCGGCTGTGGAGGAAACCGCTCCCGCTGCCGAGGCACCTGCTCCGGAAGGCCCTGCTGAGGAAGCTGCTCCCTCTACTGATGCACCAGCTGAGGCTGCTCCTGTTCCTGCTGAAGCCGCTCCTGTAGAAGAGCCTCCTAAAGCACCAACACCACCTCCTCCAGCAGTGGTCACAAGCGCCCCTCAGAACCTCAGTGTGGATGATGTCAATGATACCTCAGTCACTCTGAAGTGGAGATCCCCGGAGAACATTGGCTCTGGGCTGGACGGATATACCGTGGAACACTGCAAGGAAGGATATCGGCCCAAAATCCGCCTGCCACGTGCCCTGAGATCAAGATACGTCAAGCATGTTGGGGAACAGATCAATCTTGTCATCCCGTTCATTGGCAAACCTAAACCTGTGATATCATGGACCAAGGATGGCCAGCCTTTGGATACGAAGAAGGTGAACATCCGCAACAGCGACAAGGATAGCATTCTGTTCATCCGCAAGTCTGAGAGAGAAGACTCCGGCAGCTATGAGATGACCTTGAAGGTCGACAGCTTCGAGGACAAGGCTAACCTCGTAATTCAGATCGTCGATCTGCCCGGTCCTCCTGCCTCTGTCAAGCTAGTGGACTCTTGGGGTTTCAATGCAGCTCTGGAATGGACCGCTCCCAAAAACAACGGCAACACTGAGATAACTGGATACACTATTCAGAAGGCCGACAAGAAAACTGGAGACTGGTTCACGGTTCTGGAGCACTTCCACAGGCTAAACGCTACAGTCTCTGACCTTGTGATGGGAAATACATACACCTTCAGAGTTTTTGCAGAAAACAAGGTTGGAAGGAGTGAGAGTGCTGCTGTAACAAAAGATGCTGCTTGTATTCAGAAAACAGTCCCGGCTGAGGTTGTTGTCTCCTGTCCTGTAGGTATTGTCTACAAACCACTGGAGTACAAGGAGCATGATTTCAGCGAGGCTCCCAAGTTCACAGCGCCTCTCAGCGACAGAGCTGCCACTGTGGGCTACACCACGAAACTACTGTGCGCCGTGCGAGGCAGTCCAAAGCCTAAGATCGAGTGGCTGAAGAATCAGATGCTCATAGGAGATGATCCCAAATACAGGCAGATCAACAACCAGGGAGTGTGCTCACTTGAAATTCGCAAACCATCCAGCTTTGACGGTGGCGTCTACACTTGCAGGGCCAAGAATTCCCTTGGTGAGGCTACGGTTGCCTGTAAGCTAGAGGTCAGACagGTGATCATCCCAGATGAAAAAGACAGGAAATAAAATGTGCACAgTTCTCCTGTTGAGGAGCAGGACATAAGTCTGTAGAATGACAATGATGTTTACAGTGGTGCGGGAGGATGAGCTGAAGTGTGCGCAGTAACGAAGGCTCCGACGTgcttctgtcattaattatttcaaCAAAATCTAAGAAACTTTGGACAGTTTCTCATTTTGCTTCAAAGTATCGACACCACATCAGTGAGCTAAAAAgacaatttttagttttatattgttGCATGTATTTCAGGTGTCACTGTAGTTTGTTCCTGAAATCCCTCGTTCTAATTGAGTGTTTCCAATAAAAGAATAAACTTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU229188 lncRNA upstream 21799 4048746 ~ 4048997 (+) True G154759
TU229098 lncRNA upstream 183040 3887121 ~ 3887756 (+) True G154712
TU229078 lncRNA upstream 267032 3800350 ~ 3803764 (+) True G154699
TU229073 lncRNA upstream 271512 3797474 ~ 3799284 (+) True G154698
TU229253 lncRNA downstream 20081 4111382 ~ 4161620 (+) False G154815
TU229249 lncRNA downstream 45097 4136398 ~ 4161620 (+) True G154815
TU229284 lncRNA downstream 158018 4249319 ~ 4305432 (+) True G154837
TU229422 lncRNA downstream 459732 4551033 ~ 4553168 (+) True G154934
TU229475 lncRNA downstream 680689 4771990 ~ 4816862 (+) True G154972
XM_043224720.1 mRNA upstream 10 4059298 ~ 4070786 (+) True LOC122328783
XM_043225374.1 mRNA upstream 11464 4052531 ~ 4059332 (+) True LOC122329177
XM_043224092.1 mRNA upstream 22836 3938707 ~ 4047960 (+) True nav1a
XM_043224944.1 mRNA upstream 187992 3868102 ~ 3882804 (+) True LOC122328889
XM_043225546.1 mRNA upstream 204666 3855092 ~ 3866130 (+) False smpd2a
XM_043224718.1 mRNA downstream 3080 4094381 ~ 4110575 (+) True LOC122328782
XM_043224719.1 mRNA downstream 3080 4094381 ~ 4110575 (+) False LOC122328782
XM_043225375.1 mRNA downstream 64441 4155742 ~ 4171924 (+) True syt2a
XM_043224439.1 mRNA downstream 164601 4255902 ~ 4267013 (+) True spo11
XM_043224441.1 mRNA downstream 178545 4269846 ~ 4284232 (+) True rbm38
TU229052 other upstream 374158 3694652 ~ 3696638 (+) False ube2t
TU229053 other upstream 374158 3694652 ~ 3696638 (+) False ube2t
XR_006247841.1 other upstream 1061186 2995169 ~ 3009610 (+) False rbm10
XR_006247840.1 other upstream 1061318 2995169 ~ 3009478 (+) False rbm10
TU228663 other upstream 1114071 2955085 ~ 2956725 (+) False G154424
TU230095 other downstream 2501305 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230359 other downstream 3134693 7225994 ~ 7238919 (+) True G155561
TU230347 other downstream 3207978 7299279 ~ 7304358 (+) False tcea2
TU230667 other downstream 4240440 8331741 ~ 8333376 (+) False LOC122328506
TU230751 other downstream 4396785 8488086 ~ 8488641 (+) True G155799

Expression Profile