Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009984 |
| length | 885 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 8 |
| gene id | XLOC_005169 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 7757663 ~ 7854216 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| id | description |
|---|---|
| ZDB-GENE-060621-2 | Predicted to act upstream of or within signal transduction. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human ANK3 (ankyrin 3). |
| ensembl_id | ENSDART00000190359 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00011095 | lncRNA | downstream | 339680 | 7406088 ~ 7441307 (-) | True | XLOC_005163 |
| TCONS_00011094 | lncRNA | downstream | 458036 | 7303565 ~ 7322951 (-) | True | XLOC_005162 |
| TCONS_00009974 | lncRNA | downstream | 527750 | 7247724 ~ 7253237 (-) | False | XLOC_005160 |
| TCONS_00009975 | lncRNA | downstream | 527769 | 7247740 ~ 7253218 (-) | True | XLOC_005160 |
| TCONS_00010799 | lncRNA | downstream | 638157 | 7142467 ~ 7142830 (-) | True | XLOC_005157 |
| TCONS_00010800 | lncRNA | upstream | 197502 | 8003509 ~ 8010560 (-) | False | XLOC_005170 |
| TCONS_00011096 | lncRNA | upstream | 197502 | 8003509 ~ 8073263 (-) | True | XLOC_005170 |
| TCONS_00011097 | lncRNA | upstream | 233977 | 8039984 ~ 8046473 (-) | True | XLOC_005171 |
| TCONS_00011098 | lncRNA | upstream | 582323 | 8388330 ~ 8394645 (-) | True | XLOC_005173 |
| TCONS_00011099 | lncRNA | upstream | 671452 | 8477459 ~ 8480708 (-) | True | XLOC_005175 |
| TCONS_00009981 | mRNA | downstream | 70424 | 7699632 ~ 7710563 (-) | True | XLOC_005168 |
| TCONS_00009980 | mRNA | downstream | 125665 | 7653863 ~ 7655322 (-) | True | XLOC_005167 |
| TCONS_00009979 | mRNA | downstream | 141867 | 7609928 ~ 7639120 (-) | True | XLOC_005166 |
| TCONS_00009978 | mRNA | downstream | 173873 | 7589193 ~ 7607114 (-) | True | XLOC_005165 |
| TCONS_00009976 | mRNA | downstream | 500436 | 7268392 ~ 7280551 (-) | True | XLOC_005161 |
| TCONS_00009988 | mRNA | upstream | 258022 | 8064029 ~ 8070969 (-) | True | XLOC_005172 |
| TCONS_00009990 | mRNA | upstream | 677831 | 8483838 ~ 8486330 (-) | False | XLOC_005176 |
| TCONS_00009991 | mRNA | upstream | 678843 | 8484850 ~ 8504278 (-) | True | XLOC_005176 |
| TCONS_00009992 | mRNA | upstream | 703633 | 8509640 ~ 8511185 (-) | True | XLOC_005177 |
| TCONS_00009993 | mRNA | upstream | 775868 | 8581875 ~ 8817999 (-) | False | XLOC_005179 |
| TCONS_00009977 | other | downstream | 277889 | 7502962 ~ 7503098 (-) | True | XLOC_005164 |
| TCONS_00009972 | other | downstream | 545884 | 7223789 ~ 7235103 (-) | True | XLOC_005159 |
| TCONS_00009948 | other | downstream | 2362647 | 5399680 ~ 5418340 (-) | False | XLOC_005137 |
| TCONS_00009917 | other | downstream | 3479611 | 4298227 ~ 4301376 (-) | True | XLOC_005113 |
| TCONS_00009915 | other | downstream | 3479612 | 4297857 ~ 4301375 (-) | False | XLOC_005113 |
| TCONS_00009989 | other | upstream | 637897 | 8443904 ~ 8444021 (-) | True | XLOC_005174 |
| TCONS_00009996 | other | upstream | 1054186 | 8860193 ~ 8860307 (-) | True | XLOC_005180 |
| TCONS_00010002 | other | upstream | 1243525 | 9049532 ~ 9051178 (-) | False | XLOC_005182 |
| TCONS_00010005 | other | upstream | 1311045 | 9117052 ~ 9117178 (-) | True | XLOC_005184 |
| TCONS_00010008 | other | upstream | 1539357 | 9345364 ~ 9345485 (-) | True | XLOC_005187 |
