RNA id: XM_043233508.1


Basic Information

Item Value
RNA id XM_043233508.1
length 7445
RNA type mRNA
GC content 0.47
exon number 12
gene id ankrd12
representative False

Chromosome Information

Item Value
chromosome id NW_025048446.1
NCBI id JAEQBD010000791.1
chromosome length 1202875
location 480508 ~ 526288 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGCCGCTTTGCGTGTTTTTTCGCTGGGGCTTTTCTTAGAGACGGACTGACGGCGATGTTTTCAAAAGCAGCACCGAGAGACGTCACACAGCCGTAGGGTTAATGTTCAGTTTTCACCCTCCGACTCACACGTTTCTTTTTCTCCAAATCGTCGAGAATCCGCGCTCCGCTGGTGGGTGAATGACGAAGAGGAAGCCGAAGAGCGCTGCGACGGCCCATGATGAGATCTGTGAGCCGTAGCTGCCACAGCTAGTCAGATGATGCACCATGGCCAAACCGGGATCGGACCGAGATGGAGCCATGGTGGAGAAGACATCGGGGAAGAAGAGTAAAGAGAAAATCTCTCCGTTTGCCAAAACTCCGAAGCTGGATCGGAGTGAAATCCTGGGGAAGGAGGGGAAGTCGAAGTCTTCCATGAAAAGGAAGCTGTCCTTCACCGTCAGTCCGCCCCGGAACGAGGAGCGCGACTCCGACACGGACAAAGATGGTCCGGATAAGAAGAAAGTTAAGAAGGAGTCGGGGGCTAAGAAGTCGACCCCTGTGAACATTTTGTTCGGCTACCCTTTATCGGAACGAAAGCAGATGGCACTTGTCATGCAGATGACGGCGAGAGACAACAGTCCAGATACCACACCGAGCCACCCCTCTCAGTCTCCGGCGGTGCAGAAGAAGATCGCTAGCAGCTCGTCCTCACGACAGAAGGACAAAGTGAACAAACGGAACGAGAGGGGAGAGACGCCCCTGCACATGGCCGCCATCAGAGGAGACGTCAAGCAGGTGAAGGAGCTCATCGGGCTCGGGGCGGATGTGAACGTCAAAGATTTTGCAGgttGGACGCCTCTCCATGAAGCTTGTAACCTTGGTTACTATGATGTGGCAAAGGTTTTGATTGGTGCCGGGGCGGAAGTGAACACGCAGGGATTGGACGATGACACTCCGCTTCATGACGCCTCCAGCAGCGGACACAAAGATATTGTGAAGCTGCTCTTGCGTCATGGAGGCAATGCCTTCCAGGCCAACAAGAGAGGGGAGAGACCGGTTGATGTTGCTGACTCTCAAGAGCTAGAGAAGTTACTTAAGGGAGAGATCCCACTCTCTGAAGCAGAAGAGAGCTCTTCAGAATCAGAGGACCCACCTTCGGTAAATCCATCTAGTGTAGACGAGAACATGGAGTACTCCGATGCTGAAAAAGATTCAGACAGTAAATCTACCACAGTAAAGGCCTCTTCATCCATGTCAGGACTGGATGAATATGAGTTTaaggatgaggaagaggaggaggacctCAGTAAGGCACTAAATGACCGACACATCCTACGGCGGGAACTACGGCaaaaggagaaggaggagaaggAAAGGAACCACTATGCTTCCAAACAAGGCAGCAAAAGCGACCAGTCGACGCCGACGTGCAAGTCTAAAAAACCAAAGGCGTCGCGTGTTTACTGCAGTTCAGATAGTTCAAGTGATGAAGCCGAGGTACCAGCAGAAAGAAGGAACTCTCCCACCAGGTCGGTCAGTGTGGATGGTCACAAAATGGATGGTAGATTAAAGAAGGAAAGCCTAACTCTCACGCCAGTGGAACAGAAGGAAAAGGgtaaacagaagaaaaagaacaagAGCCAAAGCAAAAACAAGGAGAACCAGGAAGTCCGAGAAGAAGGGAAGGAGAACAGCAAATCGCTTCTGTTTTCTTCGGCAACTGTGTCCGACAATTCTGACAAGAGCGTCAGGGAAGAGGACTCGttcaaaatgtcattcagtACAAAGGATGACACATCGGTCCACCTTTTTCACCTGTCTGTAGTCAAGTCTCCAAAGCTGAACCACAGCCAAACTGACAAACAGACAACACCACTGAAACAGGAAAACGCTAAGACTTGTGTTTCTATCGCCGATGGATCCTGTCCAGGGGATAGCATCAAATACAACCACTACACGGAGTCTGACTTCTGCACAGAAGGGTCTAGCAGCAAGAGCTGCAAGCACAAGGAGAAGAGCAAACATCACCACAAAGAGCTTAACTTGGACGGAGATGACGGCAGCTGCAGTCCTTTCAAAGACAGTAGTCTAAGCAACAGTATGGACAGTTCTGAGGCTGTCTTCAGGAAGACTGACAAAGATGGGAAAGTTGTGAAAAAGCACAAACTGAAACACAAGGAGAAGGAAAAGTATAGGAAGGAGTATGAGGCTGAGAGGAATCGCCACCGGCAAAAAGAGCCACGCAAGGACGGACATAGGAACATGGAGTTTGATCGAGAGTTTTGGAAGGAGAACTTCTTCAAAAGTGATGAAAATGATGAACTCGCAAGCAAATGCGAGATGCCCGCTGGTGGATCTCCTCCAAAATCCTCAGACTCTCCTGTTAAAGAGGAGAGAGGGgcatcaaaaaacaaacatttaagcaGTAGCAGCAGTAAGGACAGAAGGCCAAAAGAGGAGCGAGAAAAGGACAAATccattaaaaaagagaaaaaagaggtGCCTTTCAAAGAGGAGCGGGGTAAGGAGGGAAAAGGAGATGAAGTTGATGAACGGAGTGAGAGTCTTGGCTCTGGCCGAGTTCCTGACAGCTCACTGCACAGTTTAGGTGTAAAAGAAGAAGTAGATGATAAACCAGTCACTAGCAGTTCATCTGACCAAGATCAACTGGAGTCTCCAGAGAAGATCTCGAGAGAGAAAAACGATAAGCGACCACCAACAAAAGATAGGGAGTCTGAAAAGTCTGATAAGAAACACGCAGATAAAGATAAGAAAGTGAAATCTGAGCATTTAGCTGACAAGACTGAACCTCACAACTCTACAGATCGAtggaaagaaaaggagaaattAACTAATATTTCGCATTCACCCAACGATAAGAGCCATAAAGAGGGTGACAAGCTCAAAGCAAtgtctttaataaaaaagcatgaAGAGAACAAGAAGAATAAGGACAAGCTTGACAAAAGAGCTGAGAAAGAGCACTCCTCTGGTGACCACAGAGACAAAGATAAAACAAGTTCTGAAAAGAAAGGCAAAGCCCCCGAGAAAACCACTGATCATGGAAAATCTGACcgcaataaagaaaaagaacgGGACAAAGATTCtgacaagaggaaaaaagagaaatcaaaAGAGACCAccccctcttcctcttcctACTCCAATCTAAAGTTGTTATTGGAAGAGAAGAAAGGTTACGTTTGTGAGAACAACAAGGTTGTTTCTTCTAAATCAAAAGAAGAGGCAACCAAGCCTCCAGAGAAAGACAGGGATAGAAGAGAGAGGGACAGGGAGTCTGAAAGGCATCGAGACCATGAGCGGGACCGACACAAGGAAAAGGACAAAGATCGATCCCAGCTGAACAGGGACGGCAAAACAAGTAAGCCGAAACCAAGTGAGGGGGACTCCAAAAGTAAGATTGCACCTATTCTAAAAGATACTCGTCCCAAAGAAAAGAGGTTGGTTAACGACGACCTCATGAAGACCAGCTTTGAACGCATGCTCAGTCTCAAGGACCAGGAAATTGAACAGTGGCACAAGAAGCACTTGGAGAAAATTAAGCAGAAGGAACGCGAGCGGCTAAAGCAGCGTCCAGGAATCGACCCTGGGAAACAGAAaagcaaggaaaaaaataaaacaccctCCTCGTCTAGTGAGCCTTGTGTAACCAAGGAATTGACTCGGTCAAAGAGCTCAGAAGCACCTGATGGGCACCGCGAGAAGGTGTTGAAAGATGCCACCAGTGGAAGAACGCTCTCGCTAGATGCGAAAACCTTCGGGAAGAATGGACCAGTCATAGAAAACAATCTCAGTCGCTCTCCGAGACCAGAGAGTGAAAAATCTGGCGTCATGTCAAGATCCGTATCCATGATCTCTGTGGCAAGCTCAGAAGATTCCTGTCATGCAACCATACTGACACCAAGACCGACCGAATATGATTCTGACATAAACATGGATGCTTCAGATTCCCAGCCACCTTTCCTTCAGTCTTCCCTCGTTGTACAGTCCTCCAGATCGCCTACTGTTCATGATAAAGATACCAGCAGTCTTCCCGAAGCGGCTCTCTGCAATCGAACACCATTATCAAGCAGGCATGCGTCCCCGTGTTTAAGGGCTATTCTGGATGAAGAAACCAAGGCGCCACCAGCTGAAACCAGACTGACAGAAGAGTCTCCGATAATCAGCATTGCGTCACAGCCAAGCAGTGAGCAAGCTACAGTTCATCCAACTGAAATTAGCTTGCTACCTGTTCAGGAGAATCGGAGCAGTCAAAGTCTTACTTGTGCTCTTCCAGAAAGCGAAAGTCTGACTAGCAGTGAAGGTGAAGGCGTCGCCCCTGTTTCTCAGGTTCAGCCTTCATCACACTTGCGAGAGTCTAGTGCTAAAAACCTAAGTACCCTCACACAGGCTAACAGTGCACTTCAGACCCATTTGCAAGAGCAGAGCGGTTCTTGCAATACTAGTAGTCAAGAAGAGCATGCAAGTCTCTGTCAGCTTGAAGTCCCTGGTGCCGGAATGACAGAGGGATCAAACAAGGAGTCTTCACTAGTTGTTACATCGCAAGTTGCATCGTTTCCGTCTTCTCACACACAAAATTTGTCTGAAACCAGTGCACCTTTGAATACTAGTAGCCAGCAGTGGGAAACTGGCCCCGTTTCTAGTAGCGAACAGACATTGATGGCGGATTCTAGTTTGAGACCAGAGCAAAGAGAGAAGCCCTTGGTTGTTTCTGAGAACAAATTGGAAAAGAGTGGTGAAAACATGAGCAAAACAGATTGCACTCCAAGTACGTCTATTGGTTCGTGTAGATCAAACTCTGAAGAAACCTCTAAACCACTGCTGAAAACAACCAGTGCCCAAGAGGATTCAGAAAAGGATGATGCAAGAGTGCAAGATGAAAGTACCTCAAAGTTCTCCAGTGAGCCGTTGGTTACAGTTGATGCTCAACCAGAGAAACACGAGCAAGGCCTTCATGCAGCTTCAGCAACAGCCGTGTCTTGCTGTGCCAGTCCAGAAAGGATCCCCGAGGAGCCCATGGAGGTGTCCGAAGATGTTTCGGACAAGAACCGAAACACAGAAGCGGATGGGGCGAAAGTCTTATCCTCAGATGAAGGCACAACAACCCAAGCTCCGTCTGAAAGCAAAGCTGACATAGAGGCATCAGACCAGCTTGCTGTCGAGGAGAAGTCTATGAAATCAGACCTTCAGGAGAATGTAGAACAGGGTCAAAGCAGTGCTGCTGTTCAACCTGATTATCAAGCAGAGCTTCCCAGTGGTGCAACCTCAGGAAGTTCCTCCCCGATATCAGTCGCGGAGAGAGATTCCGATTCATCCGGGGCCAGAGCCAAAATCCGACTCCTTGAAGACGAAGCTGACATCCAGGTGACCCATCCaaggaaaagaaagatgcaTAGGGTTTCTCCTCCGGCCCAAGTGAGCCTTACAGCTCAGCAGGTCAAAGAAAAGACCCAGCAGTCTTTAGCTGCAATTGTAGATGCACTCAAGCTTGAAGAGATCCAGCCTTACCAGACCGAAAGAGCAAACCCATATTATGAGTACCTGCACATTCGCAAAAAGATCGAGGAGAAGAGGAAAGTACTTTGCAGTGTCATTCCTCAAGCGCCTCAGTACTACGACGAGTATGTGACATTCAATGGGTCCTATCTGCTGGATGGCAACCCTCTCAGCAAGCTCTGCATCCCTACGATAACGCCACCTCCCTCACTACCTGAACCGCTGAAAGAGATGTTCAAACAGCAAGAGGTGGTGCGGATGAAGCTAAGACTGCAGCACAGCATCGAAAGGGAAAAGCTGATTGTATCCAATGAGCAGGAGGTTTTGAGAGTTCATTACCGTGCTGCAAGAACACTAGCCAATCAGACGCTTCCATTCAGTGCCTGCACAGTCCTATTGGATGCCGAAGTATACAACATGCCCCAGGACGTCCAGGGCGATGATGGGAAGACCTCCGTTAGAGATCGGTTCAATGCAAGGCAGTTTATGTCTTGGCTTCAGGATGTGGATGACAAGTTTGACAAGTTGAAGACGTGTCTCTTGATGCGGCAGCAGCACGAAGCAGCAGCGCTAAACGCCGTTCAGCGTCTGGAGTGGCAGCTGAAGCTCCAGGAGCTGGATCCCGCCACTTACAAGTCGACCAGCATTTTCGAGATTCCCGAGTTCTACATCCCCCTCGTGGAGGTCAACGACGACTTCGACCTGACGCCGATATGACCGGAGTAGCTGGCGGGGCCGCGAGACGTGAGCGTGGGAGAGGGGGGGGCGAAAGCGGGAAGCGCTCGACTCGGGAGGTGTGCGTGCGAGCgtatgctgtgtgtttgtgcgtcgACCGGACGCTTTCCAATAAAAGAAGTTTcaaaaaaaatagataacaCAAACAAGCGCTGCACTTCCAGGCTAGCTGTCATCACCGGTTCAGTCTGCGTTCGCTGTTCTGGTTCCCGGTCCAAACGCGCTTCACCATATGGGCGCCAGATTGGCTCCGACGAGACTGCAGGCCTAAACTAAAACGCACTTAACCCTGAGGTCCACCGCCCAGAACGGTAGACTACGGGTCGACAGAGGAGCGTCGAAAAAACCCAGCCTCCGGAGGGTATAGACCACCgtcgggaaaaaaaaaaagagaggtttTTCTCCTCCGTTAAGAAAGAGATCTCAATCCAACGTGTTTCTACAGTGAGTGTTCATAGATTATGTATAGATTGTGCTCCtcattttttaacttattttatacatactgattgtgcatttgtaaatagccatgtaattattgtttttaacttgtaaaaaatgacagaaaaccGAGAGGACGGAAAAagtttaagtaataataaatattttgattgtaAACTTTGTTTCGTCTAATGTTTAATGGACCAAAGTTGTTTTTACATTGAAGTTCTTcgtcgttgttgttgttattgatgTTTGCTTAACTCTTTAAGCATGTGTTTagagtttcttttcttttctttttcttttttattcctcTTTTACCCCTTTGACATTCATCAAAGCCGATGTTTTTTGACTTGTGATTTCTATAATGTGCATGCTTTCGCAGGTTCGTCCCTTTCTGAAAAGTTGTACCGTGGTGAGGTTTACTGAAGTGGTCCTGGTTCTTTTCTGCCATTGTTGTGTCTGTTAGTAACATCCACTTCTTGCGTGTCGTCCCTTGTGTCTTgcgcacatttaaaaaaaaaaaaaaagaaaaagacaaaaaagaaaaagaaaaagtttgttGTGGTTTCTCAGTGGGGCAAAAAATGCCCttacttttacagttttaatgtgaGATCACAACAAAACCTATTTTTTACAACGTAATGCCTTTTGAACAATGGTTCTAAAAATatgtctattttaatatttacttgttACATGAGGATgtacatatttgtaatatataattgaataaattttATTGGTTGTGAAATCAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU282208 lncRNA upstream 22914 435015 ~ 457595 (+) True G190184
TU282164 lncRNA upstream 48721 294272 ~ 431788 (+) True G190168
TU282192 lncRNA upstream 104869 372953 ~ 375640 (+) False G190181
TU282193 lncRNA upstream 104869 372953 ~ 375640 (+) True G190181
XR_006248995.1 lncRNA upstream 215573 264053 ~ 264936 (+) True LOC122335680
TU282366 lncRNA downstream 88918 615206 ~ 618727 (+) True G190286
TU282368 lncRNA downstream 92671 618959 ~ 619543 (+) True G190288
TU282377 lncRNA downstream 116148 642436 ~ 644346 (+) True G190296
TU282380 lncRNA downstream 118871 645159 ~ 645386 (+) True G190298
TU282382 lncRNA downstream 119567 645855 ~ 646263 (+) True G190300
XM_043233552.1 mRNA upstream 3027 471853 ~ 477482 (+) True ndufv2
XM_043233542.1 mRNA upstream 228617 244409 ~ 251892 (+) True rab12
XM_043233550.1 mRNA upstream 243985 158203 ~ 236524 (+) False LOC122335699
XM_043233510.1 mRNA downstream 1205 527493 ~ 539618 (+) True twsg1a
XM_043233506.1 mRNA downstream 15101 541389 ~ 550642 (+) True rnf126
XM_043233546.1 mRNA downstream 27796 554084 ~ 612109 (+) False LOC122335697
XM_043233547.1 mRNA downstream 29315 555603 ~ 612109 (+) False LOC122335697
XM_043233545.1 mRNA downstream 29317 555605 ~ 612109 (+) True LOC122335697
TU282180 other upstream 133355 338941 ~ 347154 (+) True G190175
XR_006248997.1 other downstream 291045 817333 ~ 836678 (+) True sirt6
XR_006248998.1 other downstream 291045 817333 ~ 836678 (+) False sirt6
TU282478 other downstream 481888 1008176 ~ 1019425 (+) False chico
TU282479 other downstream 493396 1019684 ~ 1022876 (+) False chico
TU282480 other downstream 493396 1019684 ~ 1022876 (+) False chico

Expression Profile