RNA id: TU91837



Basic Information


Item Value
RNA id TU91837
length 983
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G62021
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8362077 ~ 8371721 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


atatatatatatacacacacacacacacacacacacacacacacacacacacatatatacataaacacacatacacatacatacatatatatatctcacttacatatacatatagatatagaaacacacatacagacatatttgtgtgcgttttaaatccctttattattatcattatcatttcaAATACTCTTTTCgcaaaagtttacataccccTGTGCATAATCCGTATCACCCTAACCACCATTACAACGTAATACCATTAAATTACCACTACACCCAAGAGAGgacattaatatattgtttCAGGTGTCAACCATTATACCCTGGAGTTTAGATCACGTCTCTCTTTAAACCCCCACAATAAATTAGCCTTGTAAATGAGTGTTGATTTGTGACTGGTGGTGTTGATGGTTATTGGACTGGAGGTTTCACACTTGGCGACTCTgggaaCTGATATGGAGGTGGTGGCTCCTGATCCGGATCGTTGGCGTCACCAAAACTGGCCCTGTCTGACTGTGATTCGTGGAGCAAGGAGATATCATCCGAAGTGGGAGATTTCAGACAATTCCCCATCTCCTTTCCAAACTCCTTGTTGTCTAAATGTTGAAATACTGTCTATCCCCTGCTTTCTTCCCTTAATCACTCCAACCAGACTTTCGCCCCTTTAAACGGGATGGCTAAATCTctatcattcatttaaaacgaTCCGATCATCATGAGAAATCCTGACGGAGAAAAACAAACCATTGTCGACACACAAAGAACCCTGGCAAAAAAGTGTCAGTCACGGATATGAAACGATGTttttgtaaacacacacaatctaAACCTGTCACATACGTCTGTTTGCCCTAAAGCCGTGGTATGCAGTGTTGTCCTTTTCTCCTCGCCTCAATAGTAAACACTGGTTAGCCTTCAACGAATTATTTCTACAATCTCAAATATGCGCTCGCTCTCAATGGCGACTCAGGCAATGTTGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006251625.1 lncRNA upstream 7626 8352031 ~ 8354451 (+) True LOC122350828
TU91828 lncRNA upstream 7776 8352566 ~ 8354301 (+) False LOC122350828
TU91814 lncRNA upstream 78093 8283760 ~ 8283984 (+) True G62002
XR_006251640.1 lncRNA upstream 81742 8275575 ~ 8280335 (+) True LOC122350903
TU91675 lncRNA upstream 605953 7749708 ~ 7756124 (+) True G61916
TU91827 lncRNA downstream 20657 8392378 ~ 8394743 (+) True G62013
TU91873 lncRNA downstream 77332 8449053 ~ 8479688 (+) True G62046
TU91897 lncRNA downstream 93528 8465249 ~ 8467096 (+) True G62064
TU91872 lncRNA downstream 97336 8469057 ~ 8470836 (+) True G62045
TU91869 lncRNA downstream 105505 8477226 ~ 8478331 (+) False smim15
XM_043245981.1 mRNA upstream 10609 8347283 ~ 8351468 (+) True cdkn2c
XM_043247157.1 mRNA upstream 145195 8144177 ~ 8216882 (+) False elavl4
XM_043247877.1 mRNA downstream 85513 8457234 ~ 8463215 (+) False si:ch211-198n5.11
XM_043247876.1 mRNA downstream 85677 8457398 ~ 8463215 (+) True si:ch211-198n5.11
XM_043247027.1 mRNA downstream 105450 8477171 ~ 8478326 (+) True smim15
XM_043247023.1 mRNA downstream 108576 8480297 ~ 8488530 (+) False ercc8
XM_043247022.1 mRNA downstream 109084 8480805 ~ 8488530 (+) True ercc8
TU91548 other upstream 833009 7524635 ~ 7529068 (+) False soat1
TU91547 other upstream 838181 7306119 ~ 7523896 (+) True soat1
TU91367 other upstream 1512366 6848481 ~ 6849711 (+) True G61713
TU91369 other upstream 1512366 6848481 ~ 6849711 (+) False G61713
TU91312 other upstream 1595534 6756105 ~ 6766543 (+) False G61678
TU92500 other downstream 1332760 9704481 ~ 9705639 (+) True G62483
TU92869 other downstream 1977238 10348959 ~ 10353113 (+) False col2a1a
TU92796 other downstream 2060081 10431802 ~ 10440496 (+) False G62692
TU92799 other downstream 2097153 10468874 ~ 10478799 (+) True G62692
XR_006251600.1 other downstream 2821003 11192724 ~ 11197803 (+) False LOC122350428

Expression Profile