RNA id: TU92824



Basic Information


Item Value
RNA id TU92824
length 738
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G62703
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10149900 ~ 10150637 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGTTGCTATTCGTGttgtaagaaacaaaagaacagaGCAGGCATTGATTCCTCTCCGTACACAAGGACATCTATGCGCGCTGCATGTGCAATGCTGCAAAGCTATGAGACCGACGATTCAGCACTGTAAATTAAAGATACACGACCAAAACAACAGCCAGCACCTCCAGCCAGTGCACTCTCTGCAGCAAGCCGCGCATTACtgtaaaatctttattttgtccTTCTGTACCTGGTAACGAGGATTTCGGATCGGACGAGGCTCGAAGACTTCGCGTGGGACGTTTTCGCATTCGGTCAGTGTCCGGGTTTATTCCTCACATCCGAAGAGCACGGATTACTTCTTTGCGAAGATAAATGGATACGGAGTTATAAAAGCAGCCGACGAGATGACCAGGCGTTGAACTGCAGAACTACAAAAGCCTCTAAGCTGTAACTTTTTGGGGGGGAGGTTGGCGGTTTCGCTTCGAAATGGTACGTTAACAAATCAGTTTCATCAATATTGTGTCGTTGCTCCAAAAGACGAGGGAGATCACGAGTTGTGCACTCTTAAAGTCAAATGAGATCATCATCAACACACAGGCGCCGTGTTTCGGTTTCCCCTTCGCTTCCTCTCTCTTACCAGCCGGTTACTCCTTTTCTCGCTGGTTTTCGGCCAAACGTACGGTTTTGTGGGAAAGGCTTACAAACGCCGGCGTGTTATTTTCCCTATTGAGACGCGCAACGATTGAGATAGCTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92791 lncRNA upstream 720 10148916 ~ 10149180 (+) True G62690
TU92789 lncRNA upstream 2818 10146867 ~ 10147082 (+) True G62688
TU92787 lncRNA upstream 8016 10141522 ~ 10141884 (+) True G62686
TU92785 lncRNA upstream 10635 10137323 ~ 10139265 (+) True G62684
TU92786 lncRNA upstream 12678 10136655 ~ 10137222 (+) True G62685
TU92825 lncRNA downstream 3707 10154344 ~ 10154602 (+) True G62704
TU92793 lncRNA downstream 82961 10233598 ~ 10292220 (+) True G62691
TU92818 lncRNA downstream 84543 10235180 ~ 10241127 (+) True G62697
TU92794 lncRNA downstream 112152 10262789 ~ 10292220 (+) False G62691
TU92867 lncRNA downstream 187468 10338105 ~ 10338669 (+) True G62732
XM_043247465.1 mRNA upstream 17655 10126276 ~ 10132245 (+) True mfsd12b
XM_043247418.1 mRNA upstream 25300 10099845 ~ 10124600 (+) False csnk1g2b
XM_043247417.1 mRNA upstream 25300 10099845 ~ 10124600 (+) True csnk1g2b
XM_043247711.1 mRNA upstream 51265 10096006 ~ 10098635 (+) False zgc:101100
XM_043247464.1 mRNA downstream 1631 10152268 ~ 10231799 (+) True nfic
XM_043247661.1 mRNA downstream 109111 10259748 ~ 10264771 (+) True fzr1a
XM_043246952.1 mRNA downstream 122195 10272832 ~ 10279601 (+) True LOC122350469
XM_043246953.1 mRNA downstream 122514 10273151 ~ 10279601 (+) False LOC122350469
XM_043246942.1 mRNA downstream 151655 10302292 ~ 10313338 (+) True uck2a
TU92500 other upstream 444261 9704481 ~ 9705639 (+) True G62483
TU91548 other upstream 2620832 7524635 ~ 7529068 (+) False soat1
TU91547 other upstream 2626004 7306119 ~ 7523896 (+) True soat1
TU91367 other upstream 3300189 6848481 ~ 6849711 (+) True G61713
TU92869 other downstream 198322 10348959 ~ 10353113 (+) False col2a1a
TU92796 other downstream 281165 10431802 ~ 10440496 (+) False G62692
TU92799 other downstream 318237 10468874 ~ 10478799 (+) True G62692
XR_006251600.1 other downstream 1042087 11192724 ~ 11197803 (+) False LOC122350428
TU93183 other downstream 1144168 11294805 ~ 11311433 (+) True G62940

Expression Profile