RNA id: TU92867


Basic Information

Item Value
RNA id TU92867
length 411
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G62732
representative True

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10338105 ~ 10338669 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAAACGGGCCACTGAGATTTGCTCTTCTCCCTGGGTAATAGTGTAGAACAACAGGTCCTCCAACCCAGCAACCACCTTATTGCtgCGTCGCGACGTCCGTCTCCGTGATCACGTGCTGATGGCGCGGATGCTGGCCTGGAGATGCGCTCGTGTGCAGCAGCCGAGCGGGTGAGTGTCTTCTGTCCAGATTTCCCGCAACTCTCTCCCATTTTCCGGCGTTCCTAATGAGCAAAATACCAGCTCTGGACGCCCGCAGGGTCTTAACGCAATGCATAATCAATGCCCCGAGTTTGTATTTCTTTATCCGCGACCTATAAGAGCTCTAAACCAGTTGTGAATGAACGCCGCGTGTCTTGTGCTTATGAGTCGCGTCCTTTCCGTTGAGTGCCTGAACGCCCCACGAGGCATGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92793 lncRNA upstream 45885 10233598 ~ 10292220 (+) True G62691
TU92794 lncRNA upstream 45885 10262789 ~ 10292220 (+) False G62691
TU92818 lncRNA upstream 96978 10235180 ~ 10241127 (+) True G62697
TU92825 lncRNA upstream 183503 10154344 ~ 10154602 (+) True G62704
TU92824 lncRNA upstream 187468 10149900 ~ 10150637 (+) True G62703
TU92868 lncRNA downstream 3284 10341953 ~ 10342203 (+) True G62733
TU92876 lncRNA downstream 83184 10421853 ~ 10422562 (+) True G62739
TU92803 lncRNA downstream 107009 10445678 ~ 10484599 (+) True G62693
TU92880 lncRNA downstream 188310 10526979 ~ 10530687 (+) True G62743
TU93047 lncRNA downstream 210533 10549202 ~ 10549414 (+) False fhad1
XM_043247532.1 mRNA upstream 8326 10327300 ~ 10329779 (+) True spryd4
XM_043247454.1 mRNA upstream 11254 10320692 ~ 10326851 (+) True porcn
XM_043246214.1 mRNA upstream 21952 10314638 ~ 10316153 (+) True magoh
XM_043246942.1 mRNA upstream 24767 10302292 ~ 10313338 (+) True uck2a
XM_043246952.1 mRNA upstream 58504 10272832 ~ 10279601 (+) True LOC122350469
XM_043246631.1 mRNA downstream 10245 10348914 ~ 10367863 (+) True col2a1a
XM_043246627.1 mRNA downstream 31658 10370327 ~ 10386088 (+) True cry3a
XM_043246628.1 mRNA downstream 31658 10370327 ~ 10386088 (+) False cry3a
XM_043246629.1 mRNA downstream 31658 10370327 ~ 10386088 (+) False cry3a
XM_043246630.1 mRNA downstream 31658 10370327 ~ 10386088 (+) False cry3a
TU92500 other upstream 632466 9704481 ~ 9705639 (+) True G62483
TU91548 other upstream 2809037 7524635 ~ 7529068 (+) False soat1
TU91547 other upstream 2814209 7306119 ~ 7523896 (+) True soat1
TU91367 other upstream 3488394 6848481 ~ 6849711 (+) True G61713
TU92869 other downstream 10290 10348959 ~ 10353113 (+) False col2a1a
TU92796 other downstream 93133 10431802 ~ 10440496 (+) False G62692
TU92799 other downstream 130205 10468874 ~ 10478799 (+) True G62692
XR_006251600.1 other downstream 854055 11192724 ~ 11197803 (+) False LOC122350428
TU93183 other downstream 956136 11294805 ~ 11311433 (+) True G62940

Expression Profile