Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU92880 |
| length | 742 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G62743 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 10526979 ~ 10530687 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| GO:0017171 | serine hydrolase activity | molecular_function |
| GO:0004104 | cholinesterase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92803 | lncRNA | upstream | 42380 | 10445678 ~ 10484599 (+) | True | G62693 |
| TU92876 | lncRNA | upstream | 104417 | 10421853 ~ 10422562 (+) | True | G62739 |
| TU92868 | lncRNA | upstream | 184776 | 10341953 ~ 10342203 (+) | True | G62733 |
| TU92867 | lncRNA | upstream | 188310 | 10338105 ~ 10338669 (+) | True | G62732 |
| TU92794 | lncRNA | upstream | 234759 | 10262789 ~ 10292220 (+) | False | G62691 |
| TU93047 | lncRNA | downstream | 18515 | 10549202 ~ 10549414 (+) | False | fhad1 |
| TU93076 | lncRNA | downstream | 269006 | 10799693 ~ 10799975 (+) | True | G62868 |
| TU93081 | lncRNA | downstream | 288530 | 10819217 ~ 10819417 (+) | True | G62873 |
| TU93119 | lncRNA | downstream | 441025 | 10971712 ~ 11143096 (+) | False | G62896 |
| TU93120 | lncRNA | downstream | 441025 | 10971712 ~ 11143096 (+) | True | G62896 |
| XM_043246119.1 | mRNA | upstream | 909 | 10519695 ~ 10526070 (+) | True | alas2 |
| XM_043246112.1 | mRNA | upstream | 7410 | 10494888 ~ 10519569 (+) | True | LOC122349960 |
| XM_043246113.1 | mRNA | upstream | 7410 | 10494888 ~ 10519569 (+) | False | LOC122349960 |
| XM_043246115.1 | mRNA | upstream | 7410 | 10494888 ~ 10519569 (+) | False | LOC122349960 |
| XM_043246114.1 | mRNA | upstream | 7410 | 10494889 ~ 10519569 (+) | False | LOC122349960 |
| XM_043246121.1 | mRNA | downstream | 3050 | 10533737 ~ 10535560 (+) | True | LOC122349965 |
| XM_043246117.1 | mRNA | downstream | 5456 | 10536143 ~ 10551791 (+) | True | fhad1 |
| XM_043246118.1 | mRNA | downstream | 5456 | 10536143 ~ 10551791 (+) | False | fhad1 |
| XM_043247927.1 | mRNA | downstream | 22214 | 10552901 ~ 10557260 (+) | True | LOC122351073 |
| XM_043247894.1 | mRNA | downstream | 128714 | 10659401 ~ 10705542 (+) | True | LOC122351050 |
| TU92799 | other | upstream | 48180 | 10468874 ~ 10478799 (+) | True | G62692 |
| TU92796 | other | upstream | 86483 | 10431802 ~ 10440496 (+) | False | G62692 |
| TU92869 | other | upstream | 173866 | 10348959 ~ 10353113 (+) | False | col2a1a |
| TU92500 | other | upstream | 821340 | 9704481 ~ 9705639 (+) | True | G62483 |
| TU91548 | other | upstream | 2997911 | 7524635 ~ 7529068 (+) | False | soat1 |
| XR_006251600.1 | other | downstream | 662037 | 11192724 ~ 11197803 (+) | False | LOC122350428 |
| TU93183 | other | downstream | 764118 | 11294805 ~ 11311433 (+) | True | G62940 |
| TU93395 | other | downstream | 1031594 | 11562281 ~ 11564408 (+) | False | ppdpfa |
| unassigned_transcript_1294 | other | downstream | 1257666 | 11788353 ~ 11788424 (+) | True | trnah-gug_22 |
| unassigned_transcript_1296 | other | downstream | 1266901 | 11797588 ~ 11797660 (+) | True | trnar-acg_41 |
