Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043246214.1 |
| length | 694 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | magoh |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056706.1 |
| NCBI id | CM032075.1 |
| chromosome length | 24299999 |
| location | 10314638 ~ 10316153 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | biological_process |
| GO:0006417 | regulation of translation | biological_process |
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | biological_process |
| GO:0051028 | mRNA transport | biological_process |
| GO:0016607 | nuclear speck | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K12877 | MAGOH; protein mago nashi |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92793 | lncRNA | upstream | 22418 | 10233598 ~ 10292220 (+) | True | G62691 |
| TU92794 | lncRNA | upstream | 22418 | 10262789 ~ 10292220 (+) | False | G62691 |
| TU92818 | lncRNA | upstream | 73511 | 10235180 ~ 10241127 (+) | True | G62697 |
| TU92825 | lncRNA | upstream | 160036 | 10154344 ~ 10154602 (+) | True | G62704 |
| TU92824 | lncRNA | upstream | 164001 | 10149900 ~ 10150637 (+) | True | G62703 |
| TU92867 | lncRNA | downstream | 21952 | 10338105 ~ 10338669 (+) | True | G62732 |
| TU92868 | lncRNA | downstream | 25800 | 10341953 ~ 10342203 (+) | True | G62733 |
| TU92876 | lncRNA | downstream | 105700 | 10421853 ~ 10422562 (+) | True | G62739 |
| TU92803 | lncRNA | downstream | 129525 | 10445678 ~ 10484599 (+) | True | G62693 |
| TU92880 | lncRNA | downstream | 210826 | 10526979 ~ 10530687 (+) | True | G62743 |
| XM_043246942.1 | mRNA | upstream | 1300 | 10302292 ~ 10313338 (+) | True | uck2a |
| XM_043246952.1 | mRNA | upstream | 35037 | 10272832 ~ 10279601 (+) | True | LOC122350469 |
| XM_043246953.1 | mRNA | upstream | 35037 | 10273151 ~ 10279601 (+) | False | LOC122350469 |
| XM_043247661.1 | mRNA | upstream | 49867 | 10259748 ~ 10264771 (+) | True | fzr1a |
| XM_043247464.1 | mRNA | upstream | 82839 | 10152268 ~ 10231799 (+) | True | nfic |
| XM_043247454.1 | mRNA | downstream | 4539 | 10320692 ~ 10326851 (+) | True | porcn |
| XM_043247532.1 | mRNA | downstream | 11147 | 10327300 ~ 10329779 (+) | True | spryd4 |
| XM_043246631.1 | mRNA | downstream | 32761 | 10348914 ~ 10367863 (+) | True | col2a1a |
| XM_043246627.1 | mRNA | downstream | 54174 | 10370327 ~ 10386088 (+) | True | cry3a |
| XM_043246628.1 | mRNA | downstream | 54174 | 10370327 ~ 10386088 (+) | False | cry3a |
| TU92500 | other | upstream | 608999 | 9704481 ~ 9705639 (+) | True | G62483 |
| TU91548 | other | upstream | 2785570 | 7524635 ~ 7529068 (+) | False | soat1 |
| TU91547 | other | upstream | 2790742 | 7306119 ~ 7523896 (+) | True | soat1 |
| TU91367 | other | upstream | 3464927 | 6848481 ~ 6849711 (+) | True | G61713 |
| TU92869 | other | downstream | 32806 | 10348959 ~ 10353113 (+) | False | col2a1a |
| TU92796 | other | downstream | 115649 | 10431802 ~ 10440496 (+) | False | G62692 |
| TU92799 | other | downstream | 152721 | 10468874 ~ 10478799 (+) | True | G62692 |
| XR_006251600.1 | other | downstream | 876571 | 11192724 ~ 11197803 (+) | False | LOC122350428 |
| TU93183 | other | downstream | 978652 | 11294805 ~ 11311433 (+) | True | G62940 |
