Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_002650441.1 |
| length | 1114 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 2 |
| gene id | LOC111193336 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 15223135 ~ 15224692 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122429 | lncRNA | upstream | 99642 | 15121858 ~ 15123493 (+) | True | G91036 |
| TU122395 | lncRNA | upstream | 120004 | 15102372 ~ 15103131 (+) | True | G91009 |
| TU122375 | lncRNA | upstream | 203731 | 15018886 ~ 15019404 (+) | True | G90996 |
| TU122373 | lncRNA | upstream | 215164 | 15007020 ~ 15007971 (+) | True | G90994 |
| TU122329 | lncRNA | upstream | 254890 | 14965859 ~ 14968245 (+) | True | G90952 |
| TU122477 | lncRNA | downstream | 13694 | 15238386 ~ 15239432 (+) | True | G91075 |
| TU122482 | lncRNA | downstream | 63899 | 15288591 ~ 15288942 (+) | True | G91080 |
| TU122488 | lncRNA | downstream | 104416 | 15329108 ~ 15329399 (+) | True | G91083 |
| TU122489 | lncRNA | downstream | 104751 | 15329443 ~ 15330156 (+) | True | G91084 |
| TU122490 | lncRNA | downstream | 105903 | 15330595 ~ 15331220 (+) | True | G91085 |
| XM_007250389.3 | mRNA | upstream | 6943 | 15203250 ~ 15216192 (+) | False | alg14 |
| XM_022673638.1 | mRNA | upstream | 68117 | 15145358 ~ 15155018 (+) | True | LOC103022978 |
| XM_007250384.3 | mRNA | upstream | 68117 | 15145734 ~ 15155018 (+) | False | LOC103022978 |
| XM_007250386.3 | mRNA | upstream | 78830 | 15130223 ~ 15144305 (+) | True | abcd3 |
| XM_007250385.3 | mRNA | upstream | 78830 | 15130228 ~ 15144305 (+) | False | abcd3 |
| XM_007250391.3 | mRNA | downstream | 24109 | 15248801 ~ 15274896 (+) | True | LOC103024964 |
| XM_022673640.1 | mRNA | downstream | 24516 | 15249208 ~ 15274896 (+) | False | LOC103024964 |
| XM_022673641.1 | mRNA | downstream | 51450 | 15276142 ~ 15283049 (+) | True | LOC103025288 |
| XM_022673642.1 | mRNA | downstream | 243601 | 15468293 ~ 15481792 (+) | False | LOC103025597 |
| XM_015606115.2 | mRNA | downstream | 243661 | 15468353 ~ 15482803 (+) | True | LOC103025597 |
| TU122457 | other | upstream | 6627 | 15160215 ~ 15216508 (+) | True | alg14 |
| TU122125 | other | upstream | 948437 | 14272064 ~ 14274698 (+) | False | eif1b |
| TU121747 | other | upstream | 2274885 | 12944828 ~ 12948250 (+) | True | npy |
| TU121367 | other | upstream | 3066273 | 12154897 ~ 12156862 (+) | True | G90199 |
| TU121370 | other | upstream | 3084497 | 12135574 ~ 12138638 (+) | False | LOC103025787 |
| TU122479 | other | downstream | 51561 | 15276253 ~ 15279164 (+) | False | LOC103025288 |
| TU122481 | other | downstream | 56817 | 15281509 ~ 15283055 (+) | False | LOC103025288 |
| XR_002650442.1 | other | downstream | 1170522 | 16395214 ~ 16419380 (+) | False | trim71 |
| TU123306 | other | downstream | 2687209 | 17911901 ~ 17912443 (+) | True | G91678 |
| LOC111193302 | other | downstream | 3123332 | 18348024 ~ 18350624 (+) | True | LOC111193302 |
