Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00011789 |
| length | 925 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | XLOC_005961 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 23669659 ~ 23735251 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-090312-150 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PCNX2 (pecanex 2). |
| ensembl_id | ENSDART00000134973 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013597 | lncRNA | upstream | 259151 | 23388493 ~ 23410510 (+) | False | XLOC_005959 |
| TCONS_00013598 | lncRNA | upstream | 259151 | 23389975 ~ 23410510 (+) | True | XLOC_005959 |
| TCONS_00011784 | lncRNA | upstream | 429084 | 23227531 ~ 23240577 (+) | True | XLOC_005957 |
| TCONS_00011783 | lncRNA | upstream | 434085 | 23227531 ~ 23235576 (+) | False | XLOC_005957 |
| TCONS_00011781 | lncRNA | upstream | 458687 | 23195965 ~ 23210974 (+) | False | XLOC_005956 |
| TCONS_00013599 | lncRNA | downstream | 895388 | 24570620 ~ 24572928 (+) | True | XLOC_005975 |
| TCONS_00013600 | lncRNA | downstream | 922433 | 24597665 ~ 24598245 (+) | False | XLOC_005978 |
| TCONS_00011811 | lncRNA | downstream | 922433 | 24597665 ~ 24649939 (+) | False | XLOC_005978 |
| TCONS_00013397 | lncRNA | downstream | 922479 | 24597711 ~ 24649939 (+) | True | XLOC_005978 |
| TCONS_00011814 | lncRNA | downstream | 1000592 | 24675824 ~ 24677020 (+) | True | XLOC_005980 |
| TCONS_00011786 | mRNA | upstream | 39634 | 23623346 ~ 23630027 (+) | True | XLOC_005960 |
| TCONS_00011785 | mRNA | upstream | 281527 | 23282549 ~ 23388134 (+) | True | XLOC_005958 |
| TCONS_00011782 | mRNA | upstream | 446673 | 23214100 ~ 23222988 (+) | True | XLOC_005956 |
| TCONS_00011779 | mRNA | upstream | 446798 | 23169227 ~ 23222863 (+) | False | XLOC_005956 |
| TCONS_00011790 | mRNA | downstream | 2717 | 23677949 ~ 23714480 (+) | True | XLOC_005961 |
| TCONS_00011792 | mRNA | downstream | 168480 | 23843712 ~ 23882977 (+) | True | XLOC_005963 |
| TCONS_00011793 | mRNA | downstream | 222743 | 23897975 ~ 23901732 (+) | True | XLOC_005964 |
| TCONS_00011794 | mRNA | downstream | 313210 | 23988442 ~ 23995876 (+) | True | XLOC_005965 |
| TCONS_00011795 | mRNA | downstream | 347731 | 24022963 ~ 24056275 (+) | True | XLOC_005966 |
| TCONS_00011768 | other | upstream | 797244 | 22863545 ~ 22872417 (+) | False | XLOC_005952 |
| TCONS_00011748 | other | upstream | 1067095 | 22555938 ~ 22602566 (+) | False | XLOC_005943 |
| TCONS_00011749 | other | upstream | 1087181 | 22571943 ~ 22582480 (+) | True | XLOC_005944 |
| TCONS_00011743 | other | upstream | 1119850 | 22480857 ~ 22549811 (+) | False | XLOC_005942 |
| TCONS_00011721 | other | upstream | 1352505 | 22303916 ~ 22317156 (+) | False | XLOC_005940 |
| TCONS_00011791 | other | downstream | 145954 | 23821186 ~ 23821300 (+) | True | XLOC_005962 |
| TCONS_00011801 | other | downstream | 612491 | 24287723 ~ 24290238 (+) | True | XLOC_005969 |
| TCONS_00011821 | other | downstream | 1153521 | 24828753 ~ 24828869 (+) | True | XLOC_005984 |
| TCONS_00011850 | other | downstream | 1768752 | 25443984 ~ 25444370 (+) | False | XLOC_005997 |
| TCONS_00011851 | other | downstream | 1769052 | 25444284 ~ 25444523 (+) | True | XLOC_005997 |
