RNA id: XM_022670867.1


Basic Information

Item Value
RNA id XM_022670867.1
length 1118
RNA type mRNA
GC content 0.63
exon number 4
gene id LOC103032656
representative False

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 51416220 ~ 51508580 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

gtgtgtgtgttctgggcTCAGTCTGCAGTGTATCTCTCAGCAGCAGGGGCAGCTTCATTCTCTCCTGCAGGATGTCGGGCCCTCGGACCAGCTCCATACTGCTGCTCTTCTCCATCGCCTTCCTGCAGAGCACACTGCTGGAGGCcaagcctCTCTCTGCCATGCACGGGGGTGGAGTCGTGCGCCACCGTCGTGACCTGCGTGACTCGCTGCCCTACGAGGCTCAGATGATGTCCTACCCCCCTGCCGACTTCAAGGGGCGAGGAAACGAGCTGTACTACCAGCCGGAGGCGGTGAGGGCGCAGGGGCTGGGCCAGGCCCTCCAGCGGCTGATGGAGAACGACCAGAGGCGGGAGCAGGAGGCGGCGTACCTGTCAGGTTTGCTCCGCCTCCTGAACGAGGCCGAGAACAACGGCCAGGGGaagcaggaggaagaggaggaggaagatgaaGGAGACTTCCAGGGGCCGTATCCATCAGACTACGACGAGACGGAGCAGACGGTCAGCATGGCTAAACCTCGGGCTCTGCTGGACCCTCagctggctgaagctctgctgaaccGCTACAGGCAGGAGAGACTTCTGCAGGCTGGGATCAATCCCAACTCCAACCGCCTGCCAGACAGAGAGCAGGACAGGGACCAGGAGATGCTCCGGTACCTGGTTGAGAAAATCCTCTCCAGCCTTGGACCTGGAAACCAGCCGAGCCAACCCTCCAACCGCCGAGCCAAACGGGACGTGAGCGCCGTGTCCAGCAGCGTACGAGGCGGAGCTACCCCTCTGAGACGATCCCGGCGCTCCGTGGACTCCGCCCCCATGCCCTCGCCCAACTCCGAGGCCTCTCTGCTGCGGGTGAAGAGGCTGGGGGACGAGAGCGATGATGAAGGGTTCGCCGCTCAGAGCAGCAGAGCGCCCCACGCTGGCCTGCAGAGGATGAAGCGCATCGACACTGACCTGCCCCCTCCCCCCAAACACAGCCGCAAGCGTCGGGCAGTGACCTACGACCCCGACCTCATCGCTCAGCACATCCTACAGTACCTACcagcatagagagagagagggggaaaagatagagagagagagagagagagagagagagagagagagagagagaga

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81675 lncRNA downstream 3084 51410604 ~ 51413147 (-) True G60584
TU81653 lncRNA downstream 6969 51342696 ~ 51409262 (-) True G60566
TU81659 lncRNA downstream 56064 51358476 ~ 51360167 (-) True G60570
TU81641 lncRNA downstream 68168 51347275 ~ 51348063 (-) True G60556
XR_002650104.1 lncRNA downstream 97317 51309800 ~ 51318914 (-) True LOC111192703
TU81707 lncRNA upstream 89821 51534478 ~ 51536312 (-) False G60594
TU81708 lncRNA upstream 89821 51534478 ~ 51536312 (-) True G60594
TU81703 lncRNA upstream 94841 51539498 ~ 51580634 (-) True LOC103045940
TU81735 lncRNA upstream 200564 51645221 ~ 51647695 (-) True G60619
TU81738 lncRNA upstream 202191 51646848 ~ 51647695 (-) False G60619
XM_007245836.3 mRNA downstream 130062 51276303 ~ 51286169 (-) True LOC103030869
XM_022670859.1 mRNA downstream 143500 51216841 ~ 51272731 (-) True fgd1
XM_022670860.1 mRNA downstream 172519 51216841 ~ 51243712 (-) False fgd1
XM_007236937.3 mRNA downstream 678979 50657611 ~ 50737252 (-) True LOC103044996
XM_022670942.1 mRNA upstream 1542 51446199 ~ 51460739 (-) True LOC111192719
XM_007245843.3 mRNA upstream 14779 51459436 ~ 51475848 (-) True LOC103032967
XM_022670869.1 mRNA upstream 16436 51461093 ~ 51471858 (-) False LOC103032967
XM_022670872.1 mRNA upstream 98449 51543106 ~ 51577160 (-) False LOC103045940
XM_022670871.1 mRNA upstream 98449 51543106 ~ 51577160 (-) False LOC103045940
TU81451 other downstream 584031 50827695 ~ 50832200 (-) True G60441
TU80777 other downstream 2110979 49304608 ~ 49305252 (-) True G59951
TU80719 other downstream 2332298 49062621 ~ 49083933 (-) False LOC103030200
TU80460 other downstream 3496850 47816355 ~ 47919381 (-) False selenok
TU81746 other upstream 261681 51706338 ~ 51708112 (-) True G60627

Expression Profile