Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU18214 |
| length | 8620 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | CI01000001_06718133_06747744 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 6717159 ~ 6747744 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0004495 | mevaldate reductase activity | molecular_function |
| id | description |
|---|---|
| K04883 | KCNAB2; potassium voltage-gated channel Shaker-related subfamily A, beta member 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18220 | lncRNA | upstream | 50298 | 6672182 ~ 6673511 (+) | True | G16284 |
| TU18175 | lncRNA | upstream | 208411 | 6515121 ~ 6515398 (+) | True | G16257 |
| TU18164 | lncRNA | upstream | 290481 | 6433084 ~ 6433328 (+) | True | G16247 |
| TU18127 | lncRNA | upstream | 441257 | 6282339 ~ 6282552 (+) | True | G16212 |
| TU18107 | lncRNA | upstream | 496664 | 6226859 ~ 6227145 (+) | True | G16193 |
| TU18253 | lncRNA | downstream | 67243 | 6800168 ~ 6800381 (+) | True | G16317 |
| TU18962 | lncRNA | downstream | 182862 | 6917686 ~ 6918262 (+) | True | G16922 |
| TU18977 | lncRNA | downstream | 203217 | 6936142 ~ 6946151 (+) | True | G16937 |
| TU19054 | lncRNA | downstream | 358828 | 7091753 ~ 7123993 (+) | True | G16977 |
| TU19101 | lncRNA | downstream | 419169 | 7152094 ~ 7152425 (+) | True | G17019 |
| CI01000001_06700913_06706131.mRNA | mRNA | upstream | 17386 | 6700811 ~ 6706423 (+) | True | CI01000001_06700913_06706131 |
| CI01000001_06583486_06641365.mRNA | mRNA | upstream | 82444 | 6583486 ~ 6641365 (+) | True | CI01000001_06583486_06641365 |
| CI01000001_06564886_06568295.mRNA | mRNA | upstream | 155514 | 6564886 ~ 6568295 (+) | True | CI01000001_06564886_06568295 |
| CI01000001_06541966_06547403.mRNA | mRNA | upstream | 176064 | 6541966 ~ 6547745 (+) | True | CI01000001_06541966_06547403 |
| CI01000001_06531852_06539325.mRNA | mRNA | upstream | 184316 | 6531852 ~ 6539493 (+) | True | CI01000001_06531852_06539325 |
| CI01000001_06825263_06835397.mRNA | mRNA | downstream | 92338 | 6825263 ~ 6836463 (+) | True | CI01000001_06825263_06835397 |
| CI01000001_06884020_06889266.mRNA | mRNA | downstream | 151095 | 6884020 ~ 6889992 (+) | True | CI01000001_06884020_06889266 |
| CI01000001_06893068_06917387.mRNA | mRNA | downstream | 160143 | 6893068 ~ 6917408 (+) | False | CI01000001_06893068_06917387 |
| CI01000001_06921000_06929478.mRNA | mRNA | downstream | 188075 | 6921000 ~ 6930359 (+) | True | CI01000001_06921000_06929478 |
| CI01000001_06939316_06939879.mRNA | mRNA | downstream | 206308 | 6939233 ~ 6940705 (+) | True | CI01000001_06939316_06939879 |
| TU17891 | other | upstream | 1008858 | 5711885 ~ 5714951 (+) | True | G15995 |
| TU17699 | other | upstream | 1433853 | 5289881 ~ 5289956 (+) | True | G15838 |
| TU17650 | other | upstream | 1659105 | 5061218 ~ 5064704 (+) | False | G15794 |
| TU17651 | other | upstream | 1659880 | 5061218 ~ 5063929 (+) | True | G15794 |
| TU16602 | other | upstream | 3102358 | 3616248 ~ 3616411 (+) | True | G14846 |
| TU19033 | other | downstream | 799647 | 7532572 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19037 | other | downstream | 799715 | 7532640 ~ 7540586 (+) | False | CI01000001_07531945_07539781 |
| TU19034 | other | downstream | 799839 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU19348 | other | downstream | 1299199 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19478 | other | downstream | 2483097 | 9216022 ~ 9228859 (+) | True | G17353 |
