Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU19824 |
| length | 1959 |
| lncRNA type | read_through |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G17675 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 9763911 ~ 9836841 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19733 | lncRNA | upstream | 187126 | 9576471 ~ 9576785 (+) | True | G17602 |
| TU19732 | lncRNA | upstream | 188010 | 9575631 ~ 9575901 (+) | True | G17601 |
| TU19722 | lncRNA | upstream | 195686 | 9567903 ~ 9568225 (+) | True | G17594 |
| TU19716 | lncRNA | upstream | 205491 | 9558151 ~ 9558420 (+) | True | G17588 |
| TU19715 | lncRNA | upstream | 206014 | 9557593 ~ 9557897 (+) | True | G17587 |
| TU19861 | lncRNA | downstream | 31099 | 9855475 ~ 9863074 (+) | True | G17709 |
| TU19862 | lncRNA | downstream | 31486 | 9855862 ~ 9857182 (+) | True | G17710 |
| TU19866 | lncRNA | downstream | 61209 | 9885585 ~ 9887156 (+) | True | G17713 |
| TU19909 | lncRNA | downstream | 139535 | 9963911 ~ 9966669 (+) | True | G17751 |
| TU19916 | lncRNA | downstream | 147416 | 9971792 ~ 9973317 (+) | True | G17753 |
| CI01000001_09582178_09593275.mRNA | mRNA | upstream | 170628 | 9582178 ~ 9593283 (+) | True | CI01000001_09582178_09593275 |
| CI01000001_09533674_09538902.mRNA | mRNA | upstream | 224832 | 9533674 ~ 9539079 (+) | True | CI01000001_09533674_09538902 |
| CI01000001_09509892_09522047.mRNA | mRNA | upstream | 240830 | 9509892 ~ 9523081 (+) | True | CI01000001_09509892_09522047 |
| CI01000001_09491225_09507444.mRNA | mRNA | upstream | 255900 | 9490227 ~ 9508011 (+) | True | CI01000001_09491225_09507444 |
| CI01000001_09483845_09484834.mRNA | mRNA | upstream | 278164 | 9483845 ~ 9485747 (+) | True | CI01000001_09483845_09484834 |
| CI01000001_09932205_09934551.mRNA | mRNA | downstream | 106779 | 9931155 ~ 9935172 (+) | True | CI01000001_09932205_09934551 |
| CI01000001_09946111_09958162.mRNA | mRNA | downstream | 119744 | 9944120 ~ 9958246 (+) | True | CI01000001_09946111_09958162 |
| CI01000001_10072627_10081119.mRNA | mRNA | downstream | 248251 | 10072627 ~ 10081179 (+) | True | CI01000001_10072627_10081119 |
| CI01000001_10093069_10104108.mRNA | mRNA | downstream | 268526 | 10092902 ~ 10105699 (+) | True | CI01000001_10093069_10104108 |
| CI01000001_10141190_10146911.mRNA | mRNA | downstream | 316814 | 10141190 ~ 10148058 (+) | True | CI01000001_10141190_10146911 |
| TU19459 | other | upstream | 325848 | 9418328 ~ 9438063 (+) | True | G17334 |
| TU19479 | other | upstream | 523234 | 9234463 ~ 9240677 (+) | True | G17354 |
| TU19478 | other | upstream | 535052 | 9216022 ~ 9228859 (+) | True | G17353 |
| TU19348 | other | upstream | 1731428 | 8032124 ~ 8032483 (+) | True | G17234 |
| TU19034 | other | upstream | 2223451 | 7532764 ~ 7540460 (+) | True | CI01000001_07531945_07539781 |
| TU21219 | other | downstream | 415524 | 10239900 ~ 10241492 (+) | True | G18896 |
| TU21190 | other | downstream | 432736 | 10257112 ~ 10260714 (+) | True | G18873 |
| TU21188 | other | downstream | 446770 | 10271146 ~ 10281369 (+) | True | G18872 |
| TU21193 | other | downstream | 569181 | 10393557 ~ 10395953 (+) | True | G18875 |
| TU21268 | other | downstream | 650608 | 10474984 ~ 10476389 (+) | True | G18937 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| striped catfish (Pangasianodon hypophthalmus) | TU305000 | True | 831 | lncRNA | 0.36 | 2 | NC_047610.1 | 19660638 ~ 19666585 (+) |
