RNA id: TU805830



Basic Information


Item Value
RNA id TU805830
length 268
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G684488
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 8677182 ~ 8677633 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GATCTGTGCCTTGCCACAATTCTGTCTCTGAGCTCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTGACATGCACTGTGAGCTGTAAGGTCTTATATAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCAAATGAAGGTGTAGAACCATCTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAGGGGTCTGAATACTTGGGATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU805750 lncRNA downstream 74739 8585305 ~ 8602443 (-) True G684409
TU805746 lncRNA downstream 206170 8470509 ~ 8471012 (-) True G684405
TU805808 lncRNA downstream 212505 8464418 ~ 8464677 (-) True G684467
TU805804 lncRNA downstream 216958 8459937 ~ 8460224 (-) True G684463
TU805799 lncRNA downstream 225806 8451099 ~ 8451376 (-) True G684458
TU805836 lncRNA upstream 51641 8729274 ~ 8729476 (-) True G684494
TU805851 lncRNA upstream 249546 8927179 ~ 8927428 (-) True G684509
TU805859 lncRNA upstream 275586 8953219 ~ 8953428 (-) True G684514
TU805905 lncRNA upstream 348440 9026073 ~ 9026294 (-) True G684553
TU805906 lncRNA upstream 361447 9039080 ~ 9039312 (-) True G684554
CI01180000_08512710_08623387.mRNA mRNA downstream 53795 8512710 ~ 8623387 (-) True CI01180000_08512710_08623387
CI01180000_08176665_08187246.mRNA mRNA downstream 489936 8176624 ~ 8187246 (-) True CI01180000_08176665_08187246
CI01180000_08123227_08149912.mRNA mRNA downstream 527270 8123100 ~ 8149912 (-) True CI01180000_08123227_08149912
CI01180000_08007547_08008834.mRNA mRNA downstream 668326 8006735 ~ 8008856 (-) True CI01180000_08007547_08008834
CI01180000_07995410_08004464.mRNA mRNA downstream 672405 7995187 ~ 8004777 (-) True CI01180000_07995410_08004464
CI01180000_08700470_08707817.mRNA mRNA upstream 22207 8699840 ~ 8707817 (-) True CI01180000_08700470_08707817
CI01180000_08732856_08740755.mRNA mRNA upstream 54925 8732558 ~ 8741445 (-) True CI01180000_08732856_08740755
CI01180000_08745988_08748949.mRNA mRNA upstream 68288 8745921 ~ 8749376 (-) True CI01180000_08745988_08748949
CI01180000_08754638_08761116.mRNA mRNA upstream 77005 8754638 ~ 8761116 (-) True CI01180000_08754638_08761116
CI01180000_08794119_08796998.mRNA mRNA upstream 116486 8794119 ~ 8796998 (-) True CI01180000_08794119_08796998
TU805466 other downstream 765974 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 1094379 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 1151528 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 1264050 7403147 ~ 7413132 (-) False G684018
TU805835 other upstream 45060 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 1220791 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 2663983 11341616 ~ 11343496 (-) True G686052

Expression Profile