RNA id: CI01180000_08754638_08761116.mRNA


Basic Information

Item Value
RNA id CI01180000_08754638_08761116.mRNA
length 716
RNA type mRNA
GC content 0.44
exon number 4
gene id CI01180000_08754638_08761116
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 8754638 ~ 8761116 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGATAAATATTGCTGATTTGCAAGTGATTGCTTGGCGTCCTGACTGCATCGTTATGAAGCCTTCTGAGAATTTTCTTGGAGTTTCGGGGTCGACTAAGGAGGAGGATATCGAAACTTTGGTGCTGAGCAAAATGGAGGAATCGGCTGTGCTGTTTTGCCAACGGCTGAAATATAAAGTAAAAAGTATTCAGGTGCCAGATGGAAGTTCTTCAGATATTAATACAGAAGCCATACCATCCATCTTCCTCCCCTCAAACTGCAGAAAAACTCCTGGTAAAAAATTCAGCTGTAAGCTATGTGGCATGGAGTATCAGCGGAGCTTAGGACTGGTGATGGCTTGGCGTCCTGACTGCATCAATATGAAGCCTTCTGAGAATTTTCTTGGCGTTTTGAGGTCCAAGTCGACTAAGGAGGAGTATATCGAAACTTTGGTGCTAAGCAAAATAGAGGGATCAGCTGTGCTCTTTTGCCAACGGCTGAAATATAGAGTAAAAAGTATTCAGGTGCCAGATGGAAGTCCTTCAGATATTAAAACAGAAGCTGAACCATCCATCTCCCACTTTTCAAATGGCAAAAAGACTTCTGGTGGGGGCAGCACTGACTCTCTTTGGTTCTGCTCACCCATCCGTGAAGTGAAGAATGAAATGTCAAAAGTTGGAGATGCACATCACTGCTTCAGACTCCGAGGATGTTCCTTTGAACACGAACATTGCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805836 lncRNA downstream 25162 8729274 ~ 8729476 (-) True G684494
TU805829 lncRNA downstream 77005 8677182 ~ 8677633 (-) False G684488
TU805830 lncRNA downstream 77005 8677182 ~ 8677633 (-) True G684488
TU805750 lncRNA downstream 152195 8585305 ~ 8602443 (-) True G684409
TU805746 lncRNA downstream 283626 8470509 ~ 8471012 (-) True G684405
TU805851 lncRNA upstream 166063 8927179 ~ 8927428 (-) True G684509
TU805859 lncRNA upstream 192103 8953219 ~ 8953428 (-) True G684514
TU805905 lncRNA upstream 264957 9026073 ~ 9026294 (-) True G684553
TU805906 lncRNA upstream 277964 9039080 ~ 9039312 (-) True G684554
TU805907 lncRNA upstream 278244 9039360 ~ 9039705 (-) True G684555
CI01180000_08745988_08748949.mRNA mRNA downstream 5262 8745921 ~ 8749376 (-) True CI01180000_08745988_08748949
CI01180000_08732856_08740755.mRNA mRNA downstream 13193 8732558 ~ 8741445 (-) True CI01180000_08732856_08740755
CI01180000_08700470_08707817.mRNA mRNA downstream 46821 8699840 ~ 8707817 (-) True CI01180000_08700470_08707817
CI01180000_08512710_08623387.mRNA mRNA downstream 131251 8512710 ~ 8623387 (-) True CI01180000_08512710_08623387
CI01180000_08176665_08187246.mRNA mRNA downstream 567392 8176624 ~ 8187246 (-) True CI01180000_08176665_08187246
CI01180000_08794119_08796998.mRNA mRNA upstream 33003 8794119 ~ 8796998 (-) True CI01180000_08794119_08796998
CI01180000_08817640_08823945.mRNA mRNA upstream 56290 8817406 ~ 8824247 (-) True CI01180000_08817640_08823945
CI01180000_08829933_08835423.mRNA mRNA upstream 68579 8829695 ~ 8835423 (-) True CI01180000_08829933_08835423
CI01180000_08863723_08881179.mRNA mRNA upstream 102172 8863288 ~ 8882290 (-) True CI01180000_08863723_08881179
CI01180000_08884283_08892303.mRNA mRNA upstream 122730 8883846 ~ 8892677 (-) True CI01180000_08884283_08892303
TU805835 other downstream 30771 8722693 ~ 8723867 (-) True G684493
TU805466 other downstream 843430 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 1171835 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 1228984 7506890 ~ 7525654 (-) True G684071
TU805292 other downstream 1341506 7403984 ~ 7413132 (-) True G684018
TU806323 other upstream 1137308 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 2580500 11341616 ~ 11343496 (-) True G686052

Expression Profile