Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00023495 |
| length | 3502 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 8 |
| gene id | XLOC_011890 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 7380550 ~ 7440397 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051966 | regulation of synaptic transmission, glutamatergic | biological_process |
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007216 | G protein-coupled glutamate receptor signaling pathway | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0098839 | postsynaptic density membrane | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0099530 | G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential | molecular_function |
| GO:0099583 | neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration | molecular_function |
| GO:0008066 | glutamate receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-090821-3 | Predicted to enable G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential; adenylate cyclase inhibiting G protein-coupled glutamate receptor activity; and neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in postsynaptic density membrane. Predicted to be integral component of plasma membrane. Is expressed in brain and retinal neural layer. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 13 and spinocerebellar ataxia 44. Orthologous to human GRM1 (glutamate metabotropic receptor 1). |
| ensembl_id | ENSDART00000162002 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00024820 | lncRNA | downstream | 1098910 | 6224873 ~ 6281640 (-) | False | XLOC_011871 |
| TCONS_00024819 | lncRNA | downstream | 1100120 | 6224873 ~ 6280430 (-) | False | XLOC_011871 |
| TCONS_00024821 | lncRNA | downstream | 1117468 | 6245407 ~ 6263082 (-) | True | XLOC_011871 |
| TCONS_00024818 | lncRNA | downstream | 1407139 | 5961811 ~ 5973411 (-) | False | XLOC_011866 |
| TCONS_00024817 | lncRNA | downstream | 1416440 | 5961811 ~ 5964110 (-) | False | XLOC_011866 |
| TCONS_00024822 | lncRNA | upstream | 28074 | 7464840 ~ 7466352 (-) | True | XLOC_011892 |
| TCONS_00024526 | lncRNA | upstream | 72292 | 7509058 ~ 7511552 (-) | False | XLOC_011895 |
| TCONS_00024823 | lncRNA | upstream | 72390 | 7509156 ~ 7512065 (-) | False | XLOC_011895 |
| TCONS_00024824 | lncRNA | upstream | 72390 | 7509156 ~ 7512071 (-) | False | XLOC_011895 |
| TCONS_00024825 | lncRNA | upstream | 72390 | 7509156 ~ 7534302 (-) | False | XLOC_011895 |
| TCONS_00023494 | mRNA | downstream | 8986 | 7364911 ~ 7371564 (-) | True | XLOC_011889 |
| TCONS_00023493 | mRNA | downstream | 29062 | 7229384 ~ 7351488 (-) | True | XLOC_011888 |
| TCONS_00023492 | mRNA | downstream | 162069 | 7124059 ~ 7218481 (-) | True | XLOC_011887 |
| TCONS_00023491 | mRNA | downstream | 320073 | 6985428 ~ 7060477 (-) | True | XLOC_011886 |
| TCONS_00023490 | mRNA | downstream | 352132 | 6985428 ~ 7028418 (-) | False | XLOC_011886 |
| TCONS_00023497 | mRNA | upstream | 3692 | 7440458 ~ 7476912 (-) | False | XLOC_011891 |
| TCONS_00023498 | mRNA | upstream | 6713 | 7443479 ~ 7457698 (-) | False | XLOC_011891 |
| TCONS_00023499 | mRNA | upstream | 13937 | 7450703 ~ 7457730 (-) | False | XLOC_011891 |
| TCONS_00023500 | mRNA | upstream | 35221 | 7471987 ~ 7484354 (-) | False | XLOC_011891 |
| TCONS_00023501 | mRNA | upstream | 35238 | 7472004 ~ 7473890 (-) | True | XLOC_011891 |
| TCONS_00023487 | other | downstream | 421820 | 6958610 ~ 6958730 (-) | True | XLOC_011884 |
| TCONS_00023473 | other | downstream | 779639 | 6591230 ~ 6600911 (-) | False | XLOC_011879 |
| TCONS_00023451 | other | downstream | 1366879 | 6013555 ~ 6013671 (-) | True | XLOC_011868 |
| TCONS_00023450 | other | downstream | 1413204 | 5967249 ~ 5967346 (-) | True | XLOC_011867 |
| TCONS_00023449 | other | downstream | 1417485 | 5962975 ~ 5963065 (-) | True | XLOC_011866 |
| TCONS_00023504 | other | upstream | 67343 | 7504109 ~ 7505978 (-) | True | XLOC_011894 |
| TCONS_00023505 | other | upstream | 206765 | 7643531 ~ 7672760 (-) | False | XLOC_011896 |
| TCONS_00023511 | other | upstream | 375609 | 7812375 ~ 7818925 (-) | True | XLOC_011899 |
| TCONS_00023518 | other | upstream | 793665 | 8230431 ~ 8237652 (-) | True | XLOC_011902 |
| TCONS_00023520 | other | upstream | 929939 | 8366705 ~ 8366816 (-) | True | XLOC_011904 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000310_02410127_02438722.mRNA | True | 5289 | mRNA | 0.50 | 14 | CI01000310 | 2409947 ~ 2439037 (-) |
| bowfin (Amia calva) | AMCG00003922 | True | 2757 | mRNA | 0.52 | 8 | CM030121.1 | 24782794 ~ 24825995 (+) |
