Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU47943 |
| length | 340 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G42670 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 39489066 ~ 39489405 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47941 | lncRNA | downstream | 618 | 39488032 ~ 39488448 (-) | True | G42668 |
| TU47939 | lncRNA | downstream | 3056 | 39481644 ~ 39486010 (-) | True | c1h15orf40 |
| TU47935 | lncRNA | downstream | 9807 | 39479010 ~ 39479259 (-) | True | G42663 |
| TU47933 | lncRNA | downstream | 14016 | 39474786 ~ 39475050 (-) | True | G42661 |
| TU47864 | lncRNA | downstream | 98125 | 39389371 ~ 39390941 (-) | True | G42605 |
| TU47946 | lncRNA | upstream | 2906 | 39492311 ~ 39492521 (-) | True | G42673 |
| TU47947 | lncRNA | upstream | 3226 | 39492631 ~ 39492865 (-) | True | G42674 |
| TU47971 | lncRNA | upstream | 25663 | 39515068 ~ 39515926 (-) | True | G42695 |
| TU47969 | lncRNA | upstream | 102789 | 39592194 ~ 39643822 (-) | True | G42693 |
| TU48059 | lncRNA | upstream | 229694 | 39719099 ~ 39733553 (-) | False | LOC110522570 |
| NM_001165166.1 | mRNA | downstream | 3057 | 39481601 ~ 39486009 (-) | False | c1h15orf40 |
| NM_001160543.1 | mRNA | downstream | 129406 | 39357133 ~ 39359660 (-) | True | kip1 |
| XM_036977122.1 | mRNA | downstream | 152741 | 39315052 ~ 39336325 (-) | True | man2a2 |
| XM_036977115.1 | mRNA | downstream | 152742 | 39315052 ~ 39336324 (-) | False | man2a2 |
| XM_036977133.1 | mRNA | downstream | 152745 | 39315052 ~ 39336321 (-) | False | man2a2 |
| XM_021600938.2 | mRNA | upstream | 40763 | 39530168 ~ 39543307 (-) | False | si:ch211-59o9.10 |
| XM_021600928.2 | mRNA | upstream | 40763 | 39530168 ~ 39543310 (-) | False | si:ch211-59o9.10 |
| XM_021600945.2 | mRNA | upstream | 44902 | 39534307 ~ 39543311 (-) | True | si:ch211-59o9.10 |
| XM_021600958.2 | mRNA | upstream | 54089 | 39543494 ~ 39547739 (-) | True | LOC110522511 |
| XM_021600976.2 | mRNA | upstream | 64026 | 39553431 ~ 39563161 (-) | False | LOC110522519 |
| TU47067 | other | downstream | 467041 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 1297330 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 1363341 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 1772033 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 2978237 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU52237 | other | upstream | 3549323 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 6231400 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 6459553 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 7575369 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 7799534 | 47288939 ~ 47289681 (-) | True | G51285 |
