Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00030944 |
| length | 1370 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 7 |
| gene id | XLOC_015472 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 26237322 ~ 26284245 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008360 | regulation of cell shape | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1147 | Predicted to act upstream of or within regulation of cell shape. Predicted to be located in membrane. Is expressed in several structures, including cardiovascular system; nervous system; neural rod; trigeminal placode; and yolk syncytial layer. Orthologous to human PALM (paralemmin). |
| ensembl_id | ENSDART00000191006 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033544 | lncRNA | upstream | 72920 | 26166578 ~ 26167419 (+) | True | XLOC_015470 |
| TCONS_00030930 | lncRNA | upstream | 403507 | 25834095 ~ 25836832 (+) | True | XLOC_015465 |
| TCONS_00030924 | lncRNA | upstream | 857998 | 25315658 ~ 25382341 (+) | False | XLOC_015463 |
| TCONS_00030918 | lncRNA | upstream | 1102550 | 25130523 ~ 25137789 (+) | True | XLOC_015461 |
| TCONS_00033263 | lncRNA | upstream | 1312585 | 24912293 ~ 24927754 (+) | True | XLOC_015456 |
| TCONS_00030948 | lncRNA | downstream | 6329 | 26289302 ~ 26290690 (+) | True | XLOC_015474 |
| TCONS_00030952 | lncRNA | downstream | 199924 | 26482897 ~ 26483391 (+) | False | XLOC_015476 |
| TCONS_00030953 | lncRNA | downstream | 208786 | 26491759 ~ 26494145 (+) | False | XLOC_015476 |
| TCONS_00030954 | lncRNA | downstream | 211327 | 26494300 ~ 26495044 (+) | True | XLOC_015476 |
| TCONS_00030956 | lncRNA | downstream | 215558 | 26498531 ~ 26501306 (+) | False | XLOC_015477 |
| TCONS_00030942 | mRNA | upstream | 30914 | 26179096 ~ 26209425 (+) | True | XLOC_015471 |
| TCONS_00030941 | mRNA | upstream | 83555 | 26060528 ~ 26156784 (+) | True | XLOC_015469 |
| TCONS_00030939 | mRNA | upstream | 249555 | 25929619 ~ 25990784 (+) | True | XLOC_015467 |
| TCONS_00030938 | mRNA | upstream | 251874 | 25868404 ~ 25988465 (+) | False | XLOC_015467 |
| TCONS_00030937 | mRNA | upstream | 292704 | 25868404 ~ 25947635 (+) | False | XLOC_015467 |
| TCONS_00030947 | mRNA | downstream | 5328 | 26288301 ~ 26300619 (+) | False | XLOC_015474 |
| TCONS_00030949 | mRNA | downstream | 20654 | 26303627 ~ 26444503 (+) | True | XLOC_015475 |
| TCONS_00030950 | mRNA | downstream | 196703 | 26479676 ~ 26495042 (+) | False | XLOC_015476 |
| TCONS_00030951 | mRNA | downstream | 196703 | 26479676 ~ 26495044 (+) | False | XLOC_015476 |
| TCONS_00030955 | mRNA | downstream | 215473 | 26498446 ~ 26501868 (+) | False | XLOC_015477 |
| TCONS_00030940 | other | upstream | 200733 | 26034175 ~ 26039606 (+) | True | XLOC_015468 |
| TCONS_00030908 | other | upstream | 1394340 | 24842587 ~ 24845999 (+) | True | XLOC_015452 |
| TCONS_00030897 | other | upstream | 1699574 | 24540047 ~ 24540765 (+) | False | XLOC_015445 |
| TCONS_00030898 | other | upstream | 1699614 | 24540209 ~ 24540725 (+) | True | XLOC_015445 |
| TCONS_00030891 | other | upstream | 1742498 | 24484289 ~ 24497841 (+) | True | XLOC_015443 |
| TCONS_00030946 | other | downstream | 3492 | 26286465 ~ 26287505 (+) | True | XLOC_015473 |
| TCONS_00030957 | other | downstream | 215561 | 26498534 ~ 26501294 (+) | False | XLOC_015477 |
| TCONS_00030958 | other | downstream | 215588 | 26498561 ~ 26501275 (+) | False | XLOC_015477 |
| TCONS_00030959 | other | downstream | 215589 | 26498562 ~ 26501305 (+) | False | XLOC_015477 |
| TCONS_00030960 | other | downstream | 216676 | 26499649 ~ 26499754 (+) | False | XLOC_015477 |
