RNA id: TCONS_00032986


Basic Information

Item Value
RNA id TCONS_00032986
length 1464
RNA type mRNA
GC content 0.39
exon number 3
gene id XLOC_016847
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 48458703 ~ 48463679 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAACCTCTGGTTCCATCTAGTGGTCACTCACGTCATAACATACGATCACATGTTGGTTTTTACAGGGCTCTCCTGGAGCAGCTTTGCTATTTCTCGTCGCTATCACTATATAAACCTGCAGATGTCATGGCCAGATGCTCAGAGTTACTGCAGAGGGAATTTCACTGATCTGGCTACTGTAGACACCATGGATGATGTGAACAGGCTAATACATTCAGTGGATGCTGGATACAGTGGATCAGTGTGGATCGGACTGAAGAGTGGGACAGAGAAACGCTGGGCTTGGTCAAATGGAGAAAACACTTCTCAGTACTTCAACTGGGATTCAGGAATGCCAAATGATGATGGATACTGTGTGGCTACTTCATCTGGCAGATGGACAGATATGGCATGTTCTTATAAGCGATATTTTGTGTGTTATAaaaatacaacatattacatGATACAAAGTGCTAGAAGCTGGACAGATGCTCAGAGTTACTGCAGACAGAATTACACAGACCTGCCCACCATCCACAGCTCTGCAGAGAATGACCAGCTAAATGCAACAGCTTTAAAAAGATATTACATCTGGTTTGGTCTTTACAGAGACCCTTGGGAATGGTCTGATCAGTGGGATGTCAGATTCAGATACTGGGCATCAGGTCAACCAAACCAGGGAGTAGGATCTGACTGTGTCAGCATGTCAACAACTGATTCTGGGAAATGGAGTCGTGAAAGCTGTGATGTCCTGCATCCTTTTATCTGTTATGCAGATCACTGAAAAGTTTAAAAGCATGGGGCTGGAAAGTGACACCAAAATAAACTGGAGAAAGGAGAAGGGTGAAAAGGTGTTTGAGCTGGAGAACAGCATTGTGAAAAGTTCAGATAATACATGTAAAGTGCATccttaatgcactgtaaaaactaaaacaatatgAAGTAAAGTTACAATATTGCTTTGAGGAACAGGAAAATATTACTAGTAGCAGTACTTTATAAAACATGTACTACATTAACTATATAATAAATTGCATTaataatattagcatttttacaATACATGTGAaagatacatttagttaaataaagtaaatttctTTCCACTTCCTCTCCTTTTATGGAATTTATTTTAGTCAAATCAGATTCTTAGTTGTTCTCTGTGTTGGCACTTTCAAAGtgtcatttaattaaaacatgttgggttttgggtgaactgtcactttaatagACCTGTAACATACCCATTTTGTTTCTGATACATTattgtctccatcttgtggccAACTACAGGCACTTCGTGTTAAAAGTGTGTCATTAgaattacaataaaaaagcaaatatgCTTCTCATAAAGCTTCATGTAGACCCAATGTTGATATGCATTGTTAAGTAATGAGATGTGCTTCAGCTCCTCTATTAATGAACAGGTGCTCTGTCACTTGAAGATGTGTATCCTATAATAAACGGTATGGCCTTTTTCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000160634

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033410 lncRNA downstream 35570 48418390 ~ 48423133 (-) True XLOC_016845
TCONS_00033949 lncRNA downstream 52500 48405044 ~ 48406203 (-) False XLOC_016843
TCONS_00033948 lncRNA downstream 63179 48394943 ~ 48395524 (-) False XLOC_016842
TCONS_00033409 lncRNA downstream 183160 48267344 ~ 48275543 (-) False XLOC_016839
TCONS_00033950 lncRNA upstream 170872 48634551 ~ 48635576 (-) False XLOC_016853
TCONS_00033951 lncRNA upstream 170872 48634551 ~ 48635580 (-) True XLOC_016853
TCONS_00033411 lncRNA upstream 247469 48711148 ~ 48714636 (-) True XLOC_016854
TCONS_00033412 lncRNA upstream 267800 48731479 ~ 48732144 (-) False XLOC_016855
TCONS_00033413 lncRNA upstream 267800 48731479 ~ 48732528 (-) True XLOC_016855
TCONS_00032985 mRNA downstream 10478 48447353 ~ 48448225 (-) True XLOC_016846
TCONS_00032984 mRNA downstream 43307 48413946 ~ 48415396 (-) True XLOC_016844
TCONS_00032982 mRNA downstream 62642 48395488 ~ 48396061 (-) True XLOC_016842
TCONS_00032980 mRNA downstream 83361 48309600 ~ 48375342 (-) False XLOC_016841
TCONS_00032981 mRNA downstream 101916 48309601 ~ 48356787 (-) True XLOC_016841
TCONS_00032987 mRNA upstream 14720 48478399 ~ 48512450 (-) True XLOC_016848
TCONS_00032988 mRNA upstream 32528 48496207 ~ 48497175 (-) True XLOC_016849
TCONS_00032989 mRNA upstream 55915 48519594 ~ 48539673 (-) True XLOC_016850
TCONS_00032990 mRNA upstream 82125 48545804 ~ 48561471 (-) True XLOC_016851
TCONS_00032993 mRNA upstream 284575 48748254 ~ 48753873 (-) True XLOC_016858
TCONS_00032983 other downstream 52498 48405272 ~ 48406205 (-) True XLOC_016843
TCONS_00032976 other downstream 301466 48145089 ~ 48157237 (-) True XLOC_016835
TCONS_00032964 other downstream 605619 47852969 ~ 47853084 (-) True XLOC_016829
TCONS_00032961 other downstream 913064 47541737 ~ 47545639 (-) True XLOC_016826
TCONS_00032960 other downstream 993867 47432087 ~ 47464836 (-) True XLOC_016825
TCONS_00032991 other upstream 101151 48564830 ~ 48564946 (-) True XLOC_016852
TCONS_00032992 other upstream 283004 48746683 ~ 48746812 (-) True XLOC_016857
TCONS_00033002 other upstream 1203077 49666756 ~ 49667049 (-) True XLOC_016868
TCONS_00033003 other upstream 1303899 49767578 ~ 49769552 (-) True XLOC_016869
TCONS_00033024 other upstream 2009747 50473426 ~ 50473542 (-) True XLOC_016880

Expression Profile

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