RNA id: TCONS_00033036



Basic Information


Item Value
RNA id TCONS_00033036
length 1223
RNA type mRNA
GC content 0.39
exon number 9
gene id XLOC_016892
representative False

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 51251589 ~ 51259378 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tgcggacATGATTCACCCTCTGATTCTCGCTGGGGTTTTACTTCACATTGGagATGGAGTTTGGATTAATAAACTGAATATAGGAGTGAAATCTGGATCTCCAGGCATTATTCCATGTCTATATGAAGAACAATATAAAGAACACCAGAAGTATTGGTGTCGGGGATACATTTGGAGCTCTTGCTCTATATTGGCTTATGTAAATGAAACAAGAAATAAATTCTCCATCACTGATTATCCAGCACAGAGTATCTTTACAGTGGAATGGCAGAATCTGCAGGAGTCCAACTCTTCATATTACTGGTGCGCTGTGGAGATCGGTGGTCCTGGGACACTAGACGCTGGTTATTATTTGTATCTGACGGTACAATCAGATCCTGCTCTGTCTGTGTTGAACAGCAGTGTATCCGGACATGAAGGTGGTAATGTCAGTGTTCAGTGTTTCTACAGTTCTGGATATAAGGCTAAAACCAAACAGTGGTGCAGATTTAAAGATAAGAGCTGTTTCACAGAGAAAAAGACTGACACGTTCCAGAATCCATCAGTGCAGATCAGTGATGATGGTAAAAGCTCCTTCACTGTGCTGATGACTGGACTGAGACTCTCTGATTCTGGATGGTATTTCTGCTCTGTTGGAGATCTGCAGGTTCCTGTTCAACTCACTGTCACTAAACCTGTACCCAAAGGCAGGAACACAACACAACTCTCCACCAACACGacttctgcaaaaatgcattCAACAATAAACAGTAAGAAGCAGCTAAATTGGATTATTTAGAAATTATTCAGAAAAGGTGAACAAATTAAGAAAGAAGAACGTGTTGACAGCAGCACCATGAAAACTATGCCCCCTGAAAACCAAATGACATCTATCAGTCCTGCAGAAGCTGATTCTTCTGCAGATGACGCTTCAGTGCTTTACAGTCCTGTCTCCTTTACAAAGACACGTTTATCATCAGTGGATCCAGAACCTGATGTGCTCTACAGCACTGTGATGAAAGATCGCAAAAATGTATAATGCAGAATTAATTCATGGCCAAATATTGGATGAATGCGGCACATCAGTATATTTGAAGAAGATGAATCCtgctttaataaatttttttttctcatcctTAAATTTAAGTCCAAATTACCATTAAGTCCGAAGACAATTTATCAGgtttttacaacaaaaaagagagaaacaacccaaaaataaccaaaaatctaactaaaatatc

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000157792

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033960 lncRNA downstream 44142 51175997 ~ 51207447 (-) True XLOC_016890
TCONS_00033959 lncRNA downstream 61882 51175997 ~ 51189707 (-) False XLOC_016890
TCONS_00033958 lncRNA downstream 460991 50790093 ~ 50790598 (-) True XLOC_016884
TCONS_00033957 lncRNA downstream 461008 50774409 ~ 50790581 (-) False XLOC_016884
TCONS_00033021 lncRNA downstream 979564 50254255 ~ 50272025 (-) True XLOC_016878
TCONS_00033961 lncRNA upstream 39950 51299328 ~ 51300918 (-) False XLOC_016895
TCONS_00033414 lncRNA upstream 71674 51331052 ~ 51368890 (-) True XLOC_016897
TCONS_00033415 lncRNA upstream 109850 51369228 ~ 51372091 (-) True XLOC_016898
TCONS_00033962 lncRNA upstream 139209 51398587 ~ 51407308 (-) False XLOC_016900
TCONS_00033416 lncRNA upstream 146222 51405600 ~ 51407126 (-) True XLOC_016900
TCONS_00033034 mRNA downstream 27931 51220283 ~ 51223658 (-) False XLOC_016891
TCONS_00033035 mRNA downstream 30391 51220555 ~ 51221198 (-) True XLOC_016891
TCONS_00033033 mRNA downstream 142113 51098549 ~ 51109476 (-) True XLOC_016889
TCONS_00033032 mRNA downstream 154942 51090529 ~ 51096647 (-) True XLOC_016888
TCONS_00033031 mRNA downstream 155846 51088448 ~ 51095743 (-) False XLOC_016888
TCONS_00033039 mRNA upstream 14417 51273795 ~ 51275873 (-) True XLOC_016893
TCONS_00033040 mRNA upstream 22401 51281779 ~ 51290607 (-) False XLOC_016894
TCONS_00033041 mRNA upstream 22478 51281856 ~ 51316195 (-) False XLOC_016894
TCONS_00033042 mRNA upstream 41239 51300617 ~ 51303937 (-) True XLOC_016895
TCONS_00033043 mRNA upstream 48587 51307965 ~ 51316190 (-) False XLOC_016894
TCONS_00033026 other downstream 542107 50709366 ~ 50709482 (-) True XLOC_016882
TCONS_00033024 other downstream 778047 50473426 ~ 50473542 (-) True XLOC_016880
TCONS_00033003 other downstream 1482037 49767578 ~ 49769552 (-) True XLOC_016869
TCONS_00033002 other downstream 1584540 49666756 ~ 49667049 (-) True XLOC_016868
TCONS_00032992 other downstream 2504777 48746683 ~ 48746812 (-) True XLOC_016857
TCONS_00033049 other upstream 156125 51415503 ~ 51415811 (-) True XLOC_016902
TCONS_00033050 other upstream 169795 51429173 ~ 51429490 (-) True XLOC_016903
TCONS_00033052 other upstream 198735 51458113 ~ 51458228 (-) True XLOC_016905
TCONS_00033068 other upstream 477719 51737097 ~ 51741713 (-) False XLOC_016919
TCONS_00033071 other upstream 479308 51738686 ~ 51748935 (-) False XLOC_016919

Expression Profile


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