RNA id: TCONS_00033199


Basic Information

Item Value
RNA id TCONS_00033199
length 657
RNA type mRNA
GC content 0.47
exon number 2
gene id XLOC_017024
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 59154588 ~ 59157790 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGCAGAATCCAGTGTGTCTTTGGCTCATCATGAGTTCAGCTGTTCGGTGTGTCTGGATCTCCTGAAGGATCCAGTCTCCATTCCCTGTGGACACAGTTACTGTATGAGCTGCATCACAGACTGCTGGAATCAGGAGGATCAGAAGAGAGTCTACAGCTGCCCTCAGTGCAGACAGACCTTCTGCCCCAGACCCGCTTTAGCTAAAAACACCATGCTGGCTGAAGTGCtggagaaactgcagaagagcaaACTACAAGCTGCTGGTCCTGCTCAGAGTCCCGCTGCATCTGGAGATGTGGAGTGTGACGTCTGTACTGGAGCCAAAAACAGAGCCGTCAAGTCCTGTCTGGTGTGTCTGAACTCTTACTGTCACACTCATTTCCAGCGACATCAAGAAATTCACCAAGGAAATCGACACAAAGTGACTGAAGCCACTCATAAACTGCAGGAGATGATCTGTCCTCAACATGAGAAACTCCTGGAGATCTTCTGCCGCACTGATCACTGCTGTATTTGTTATCTGTGTTTGGTTGATCAACACAAACACCATGACACTGTTTCAGCTGCAGCAGAGAGGACTGAACTACAGACTGATAAATGCTTTACTGATAcaactttatttaaatgtgttgcaggaacagaaattggtgattaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000192303

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00034026 lncRNA downstream 33748 59093307 ~ 59120840 (-) False XLOC_017022
TCONS_00033439 lncRNA downstream 37614 59094437 ~ 59116974 (-) False XLOC_017022
TCONS_00034025 lncRNA downstream 37716 59093307 ~ 59116872 (-) False XLOC_017022
TCONS_00034024 lncRNA downstream 50618 59093307 ~ 59103970 (-) False XLOC_017022
TCONS_00034023 lncRNA downstream 52421 59093307 ~ 59102167 (-) False XLOC_017022
TCONS_00034027 lncRNA upstream 221376 59379166 ~ 59390269 (-) False XLOC_017036
TCONS_00034029 lncRNA upstream 221376 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00034028 lncRNA upstream 221376 59379166 ~ 59390464 (-) False XLOC_017036
TCONS_00033198 mRNA downstream 9561 59135878 ~ 59145027 (-) True XLOC_017023
TCONS_00033195 mRNA downstream 234613 58914674 ~ 58919975 (-) True XLOC_017017
TCONS_00033191 mRNA downstream 252111 58887599 ~ 58902477 (-) False XLOC_017016
TCONS_00033201 mRNA upstream 17082 59174872 ~ 59178801 (-) False XLOC_017025
TCONS_00033202 mRNA upstream 19392 59177182 ~ 59178742 (-) True XLOC_017025
TCONS_00033203 mRNA upstream 32876 59190666 ~ 59205441 (-) False XLOC_017026
TCONS_00033204 mRNA upstream 44965 59202755 ~ 59205393 (-) False XLOC_017026
TCONS_00033205 mRNA upstream 46296 59204086 ~ 59205393 (-) True XLOC_017026
TCONS_00033197 other downstream 52336 59102169 ~ 59102252 (-) True XLOC_017022
TCONS_00033196 other downstream 116276 59038195 ~ 59038312 (-) True XLOC_017019
TCONS_00033190 other downstream 285135 58868109 ~ 58869453 (-) True XLOC_017015
TCONS_00033188 other downstream 517796 58636676 ~ 58636792 (-) True XLOC_017010
TCONS_00033170 other downstream 1212725 57940680 ~ 57941863 (-) True XLOC_016993
TCONS_00033216 other upstream 177991 59335781 ~ 59336963 (-) True XLOC_017033
TCONS_00033220 other upstream 224638 59382428 ~ 59390464 (-) True XLOC_017036

Expression Profile

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