Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00036616 |
| length | 959 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 7 |
| gene id | XLOC_017460 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 34029820 ~ 34039638 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006955 | immune response | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0030247 | polysaccharide binding | molecular_function |
| GO:0005044 | scavenger receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00034689 | lncRNA | upstream | 54544 | 33959570 ~ 33975292 (+) | True | XLOC_017455 |
| TCONS_00034682 | lncRNA | upstream | 283942 | 33745467 ~ 33745894 (+) | True | XLOC_017451 |
| TCONS_00034681 | lncRNA | upstream | 284585 | 33744350 ~ 33745251 (+) | False | XLOC_017451 |
| TCONS_00036615 | lncRNA | upstream | 499805 | 33519785 ~ 33530031 (+) | True | XLOC_017444 |
| TCONS_00036614 | lncRNA | upstream | 971292 | 33057784 ~ 33058544 (+) | True | XLOC_017441 |
| TCONS_00036617 | lncRNA | downstream | 293681 | 34326878 ~ 34341183 (+) | False | XLOC_017463 |
| TCONS_00034704 | lncRNA | downstream | 300944 | 34334141 ~ 34337750 (+) | False | XLOC_017463 |
| TCONS_00034705 | lncRNA | downstream | 305128 | 34338325 ~ 34339582 (+) | True | XLOC_017463 |
| TCONS_00034710 | lncRNA | downstream | 359582 | 34392779 ~ 34394003 (+) | True | XLOC_017465 |
| TCONS_00034724 | lncRNA | downstream | 571750 | 34604947 ~ 34608264 (+) | False | XLOC_017470 |
| TCONS_00034693 | mRNA | upstream | 19601 | 33994580 ~ 34010235 (+) | True | XLOC_017459 |
| TCONS_00034692 | mRNA | upstream | 36138 | 33991801 ~ 33993698 (+) | True | XLOC_017458 |
| TCONS_00034691 | mRNA | upstream | 40409 | 33987465 ~ 33989427 (+) | True | XLOC_017457 |
| TCONS_00034690 | mRNA | upstream | 44093 | 33981946 ~ 33985743 (+) | True | XLOC_017456 |
| TCONS_00034686 | mRNA | upstream | 89576 | 33922339 ~ 33940260 (+) | False | XLOC_017454 |
| TCONS_00034696 | mRNA | downstream | 96268 | 34129465 ~ 34144371 (+) | False | XLOC_017461 |
| TCONS_00034697 | mRNA | downstream | 96268 | 34129465 ~ 34148190 (+) | False | XLOC_017461 |
| TCONS_00034698 | mRNA | downstream | 97517 | 34130714 ~ 34144909 (+) | True | XLOC_017461 |
| TCONS_00034699 | mRNA | downstream | 118473 | 34151670 ~ 34154928 (+) | False | XLOC_017462 |
| TCONS_00034700 | mRNA | downstream | 118488 | 34151685 ~ 34155608 (+) | False | XLOC_017462 |
| TCONS_00034653 | other | upstream | 1559382 | 32466886 ~ 32470454 (+) | True | XLOC_017433 |
| TCONS_00034652 | other | upstream | 1597369 | 32408887 ~ 32432467 (+) | True | XLOC_017432 |
| TCONS_00034641 | other | upstream | 2306339 | 31722252 ~ 31723497 (+) | True | XLOC_017426 |
| TCONS_00034640 | other | upstream | 2642665 | 31387055 ~ 31387171 (+) | True | XLOC_017425 |
| TCONS_00034636 | other | upstream | 2806809 | 31217539 ~ 31223027 (+) | True | XLOC_017422 |
| TCONS_00034740 | other | downstream | 910174 | 34943371 ~ 34955260 (+) | True | XLOC_017481 |
| TCONS_00034743 | other | downstream | 1029609 | 35062806 ~ 35063981 (+) | True | XLOC_017485 |
| TCONS_00034756 | other | downstream | 1246799 | 35279996 ~ 35288971 (+) | False | XLOC_017488 |
| TCONS_00034760 | other | downstream | 1349241 | 35382438 ~ 35382617 (+) | False | XLOC_017489 |
| TCONS_00034762 | other | downstream | 1389501 | 35422698 ~ 35422827 (+) | True | XLOC_017490 |
